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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g038151v5   uncharacterized protein 
 ath-u.5   AT1G05910   cell division cycle protein 48-related / CDC48-like protein 
 gma-u.5   100787765   ATPase family AAA domain-containing protein At1g05910 
 gma-u.5   100783127   ATPase family AAA domain-containing protein At1g05910 
 sly-u.5   101251280   ATPase family AAA domain-containing protein 
 osa-u.5   4347572   ATPase family AAA domain-containing protein At1g05910 
 zma-u.5   541979   bromodomain protein 103 
 bra-r.6   103844083   ATPase family AAA domain-containing protein At1g05910 
 bra-r.6   103843581   ATPase family AAA domain-containing protein At1g05910 
 vvi-u.5   100242365   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   18106930   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   18106927   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   7491763   ATPase family AAA domain-containing protein At1g05910 
 mtr-u.5   25492654   ATPase family AAA domain-containing protein At1g05910 
 tae-r.2   123104414   ATPase family AAA domain-containing protein At1g05910 
 tae-r.2   123112687   ATPase family AAA domain-containing protein At1g05910 
 tae-r.2   123116555   ATPase family AAA domain-containing protein At1g05910 
 hvu-r.1   123399899   ATPase family AAA domain-containing protein At1g05910 
 ghi-r.1   107957233   ATPase family AAA domain-containing protein At1g05910 
 ghi-r.1   107934846   ATPase family AAA domain-containing protein At1g05910 
 ghi-r.1   107927447   ATPase family AAA domain-containing protein At1g05910 
 bna-r.1   125579411   ATPase family AAA domain-containing protein At1g05910 
 bna-r.1   106420137   ATPase family AAA domain-containing protein At1g05910 
 bna-r.1   106400815   ATPase family AAA domain-containing protein At1g05910 
 sbi-r.1   8059003   ATPase family AAA domain-containing protein At1g05910 
 sot-r.1   102583998   ATPase family AAA domain-containing protein At1g05910 
 cit-r.1   102614345   ATPase family AAA domain-containing protein At1g05910 
 bdi-r.1   100831484   ATPase family AAA domain-containing protein At1g05910 
 nta-r.1   107792372   ATPase family AAA domain-containing protein At1g05910 
 nta-r.1   107779945   ATPase family AAA domain-containing protein At1g05910-like 

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Top 50 coexpressed genes to CHLRE_01g038151v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g038151v5 (cre-r.1 coexpression data)

CoexMap"5715509"


creCHLRE_01g038151v5 | Entrez gene ID : 5715509    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 1 3 1 3 1 3 3 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (47 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (34 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (81 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (290 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042928670.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 4,  nucl 3,  cyto 3,  chlo 3  (predict for XP_042928670.1)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for XP_042928670.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g038151v5
ath-u.5
for
AT1G05910
gma-u.5
for
100787765
gma-u.5
for
100783127
sly-u.5
for
101251280
osa-u.5
for
4347572
zma-u.5
for
541979
bra-r.6
for
103844083
bra-r.6
for
103843581
vvi-u.5
for
100242365
ppo-u.5
for
18106930
ppo-u.5
for
18106927
ppo-u.5
for
7491763
mtr-u.5
for
25492654
tae-r.2
for
123104414
tae-r.2
for
123112687
tae-r.2
for
123116555
hvu-r.1
for
123399899
ghi-r.1
for
107957233
ghi-r.1
for
107934846
ghi-r.1
for
107927447
bna-r.1
for
125579411
bna-r.1
for
106420137
bna-r.1
for
106400815
sbi-r.1
for
8059003
sot-r.1
for
102583998
cit-r.1
for
102614345
bdi-r.1
for
100831484
nta-r.1
for
107792372
nta-r.1
for
107779945


Ortholog ID: 7017
Species cre ath gma gma sly osa zma bra bra vvi ppo ppo ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g038151v5 AT1G05910 LOC100787765 LOC100783127 LOC101251280 LOC4347572 LOC541979 LOC103844083 LOC103843581 LOC100242365 LOC18106930 LOC18106927 LOC7491763 LOC25492654 LOC123104414 LOC123116555 LOC123122179 LOC123399899 LOC107934846 LOC107927447 LOC107903820 LOC125579411 LOC106420137 LOC106400815 LOC8059003 LOC102583998 LOC102614345 LOC100831484 LOC107792372 LOC107779945
Function* uncharacterized protein cell division cycle protein 48-related / CDC48-like protein ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein ATPase family AAA domain-containing protein At1g05910 bromodomain protein 103 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03420 Nucleotide excision repair 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715509 837101 100787765 100783127 101251280 4347572 541979 103844083 103843581 100242365 18106930 18106927 7491763 25492654 123104414 123116555 123122179 123399899 107934846 107927447 107903820 125579411 106420137 106400815 8059003 102583998 102614345 100831484 107792372 107779945
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