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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107957233   ATPase family AAA domain-containing protein At1g05910 
 ath-u.5   AT1G05910   cell division cycle protein 48-related / CDC48-like protein 
 gma-u.5   100783127   ATPase family AAA domain-containing protein At1g05910 
 gma-u.5   100787765   ATPase family AAA domain-containing protein At1g05910 
 vvi-u.5   100242365   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   7491763   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   18106930   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   18106927   ATPase family AAA domain-containing protein At1g05910 
 mtr-u.5   25492654   ATPase family AAA domain-containing protein At1g05910 
 sly-u.5   101251280   ATPase family AAA domain-containing protein 
 osa-u.5   4347572   ATPase family AAA domain-containing protein At1g05910 
 zma-u.5   541979   bromodomain protein 103 

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Top 50 coexpressed genes to 107957233 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107957233 (ghi-r.1 coexpression data)

CoexMap"107957233"


ghiLOC107957233 | Entrez gene ID : 107957233    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (349 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (158 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (366 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016748183.2 [sequence] [blastp]
XP_016748184.2 [sequence] [blastp]
XP_016748185.2 [sequence] [blastp]
XP_016748186.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for XP_016748183.2)
nucl 6,  cyto 4  (predict for XP_016748184.2)
chlo 6,  nucl 2,  mito 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_016748185.2)
nucl 4,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_016748186.2)
Subcellular
localization
TargetP
other 7  (predict for XP_016748183.2)
other 7  (predict for XP_016748184.2)
chlo 8  (predict for XP_016748185.2)
other 7  (predict for XP_016748186.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107957233
ath-u.5
for
AT1G05910
gma-u.5
for
100783127
gma-u.5
for
100787765
vvi-u.5
for
100242365
ppo-u.5
for
7491763
ppo-u.5
for
18106930
ppo-u.5
for
18106927
mtr-u.5
for
25492654
sly-u.5
for
101251280
osa-u.5
for
4347572
zma-u.5
for
541979


Ortholog ID: 7017
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107903820 LOC107934846 AT1G05910 LOC103844083 LOC103843581 LOC106400815 LOC125579411 LOC102614345 LOC100783127 LOC100787765 LOC100242365 LOC18106927 LOC18106930 LOC25492654 LOC101251280 LOC102583998 LOC107779945 LOC107792372 LOC4347572 LOC541979 LOC123122179 LOC123116555 LOC123399899 LOC8059003 LOC100831484 CHLRE_01g038151v5
Function* ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 cell division cycle protein 48-related / CDC48-like protein ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910-like ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 bromodomain protein 103 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03420 Nucleotide excision repair 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107903820 107934846 837101 103844083 103843581 106400815 125579411 102614345 100783127 100787765 100242365 18106927 18106930 25492654 101251280 102583998 107779945 107792372 4347572 541979 123122179 123116555 123399899 8059003 100831484 5715509
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