Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   541979   bromodomain protein 103 
 zma-r.6   541979   bromodomain protein 103 
 zma-m.5   541979   bromodomain protein 103 
 osa-u.5   4347572   ATPase family AAA domain-containing protein At1g05910 
 ath-u.5   AT1G05910   cell division cycle protein 48-related / CDC48-like protein 
 gma-u.5   100787765   ATPase family AAA domain-containing protein At1g05910 
 gma-u.5   100783127   ATPase family AAA domain-containing protein At1g05910 
 sly-u.5   101251280   ATPase family AAA domain-containing protein 
 vvi-u.5   100242365   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   18106930   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   18106927   ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5   7491763   ATPase family AAA domain-containing protein At1g05910 
 mtr-u.5   25492654   ATPase family AAA domain-containing protein At1g05910 

close


Top 50 coexpressed genes to 541979 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 541979 (zma-u.5 coexpression data)

CoexMap"541979"


zmaLOC541979 | Entrez gene ID : 541979      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 2 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006337 [list] [network] nucleosome disassembly  (2 genes)  IEA  
GO:0045815 [list] [network] transcription initiation-coupled chromatin remodeling  (2 genes)  IEA  
GO:0006334 [list] [network] nucleosome assembly  (36 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (70 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (149 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (485 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
Protein NP_001105102.1 [sequence] [blastp]
XP_008651836.1 [sequence] [blastp]
XP_008651837.1 [sequence] [blastp]
XP_035816657.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for NP_001105102.1)
nucl 8,  cyto 2  (predict for XP_008651836.1)
nucl 6,  cyto 4  (predict for XP_008651837.1)
nucl 8,  cyto 2  (predict for XP_035816657.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001105102.1)
other 6  (predict for XP_008651836.1)
other 6  (predict for XP_008651837.1)
other 6  (predict for XP_035816657.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
541979

.
zma-r.6
for
541979

.
zma-m.5
for
541979

.
osa-u.5
for
4347572

.
ath-u.5
for
AT1G05910

.
gma-u.5
for
100787765

.
gma-u.5
for
100783127

.
sly-u.5
for
101251280

.
vvi-u.5
for
100242365

.
ppo-u.5
for
18106930

.
ppo-u.5
for
18106927

.
ppo-u.5
for
7491763

.
mtr-u.5
for
25492654

.


Ortholog ID: 7017
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G05910 LOC100783127 LOC100787765 LOC101251280 LOC4347572 LOC541979 LOC103844083 LOC103843581 LOC100242365 LOC18106927 LOC18106930 LOC25492654 LOC123122179 LOC123116555 LOC123399899 LOC107903820 LOC107934846 LOC106400815 LOC125579411 CHLRE_01g038151v5 LOC8059003 LOC102583998 LOC102614345 LOC100831484 LOC107779945 LOC107792372
Function* cell division cycle protein 48-related / CDC48-like protein ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein ATPase family AAA domain-containing protein At1g05910 bromodomain protein 103 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 uncharacterized protein ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910-like ATPase family AAA domain-containing protein At1g05910
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03420 Nucleotide excision repair 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837101 100783127 100787765 101251280 4347572 541979 103844083 103843581 100242365 18106927 18106930 25492654 123122179 123116555 123399899 107903820 107934846 106400815 125579411 5715509 8059003 102583998 102614345 100831484 107779945 107792372
The preparation time of this page was 0.1 [sec].