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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6  103843581  ATPase family AAA domain-containing protein At1g05910 
 bra-r.6  103844083  ATPase family AAA domain-containing protein At1g05910 
 bna-r.1  106420137  ATPase family AAA domain-containing protein At1g05910 
 bna-r.1  106400815  ATPase family AAA domain-containing protein At1g05910 
 bna-r.1  125579411  ATPase family AAA domain-containing protein At1g05910 
 ath-u.5  AT1G05910  cell division cycle protein 48-related / CDC48-like protein 
 ghi-r.1  107957233  ATPase family AAA domain-containing protein At1g05910 
 ghi-r.1  107934846  ATPase family AAA domain-containing protein At1g05910 
 ghi-r.1  107927447  ATPase family AAA domain-containing protein At1g05910 
 cit-r.1  102614345  ATPase family AAA domain-containing protein At1g05910 
 gma-u.5  100783127  ATPase family AAA domain-containing protein At1g05910 
 gma-u.5  100787765  ATPase family AAA domain-containing protein At1g05910 
 vvi-u.5  100242365  ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5  18106927  ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5  7491763  ATPase family AAA domain-containing protein At1g05910 
 ppo-u.5  18106930  ATPase family AAA domain-containing protein At1g05910 
 mtr-u.5  25492654  ATPase family AAA domain-containing protein At1g05910 
 sly-u.5  101251280  ATPase family AAA domain-containing protein 
 sot-r.1  102583998  ATPase family AAA domain-containing protein At1g05910 
 nta-r.1  107779945  ATPase family AAA domain-containing protein At1g05910-like 
 nta-r.1  107792372  ATPase family AAA domain-containing protein At1g05910 
 osa-u.5  4347572  ATPase family AAA domain-containing protein At1g05910 
 zma-u.5  541979  bromodomain protein 103 
 tae-r.2  123122179  ATPase family AAA domain-containing protein At1g05910 
 tae-r.2  123116555  ATPase family AAA domain-containing protein At1g05910 
 tae-r.2  123112687  ATPase family AAA domain-containing protein At1g05910 
 hvu-r.1  123399899  ATPase family AAA domain-containing protein At1g05910 
 sbi-r.1  8059003  ATPase family AAA domain-containing protein At1g05910 
 bdi-r.1  100831484  ATPase family AAA domain-containing protein At1g05910 
 cre-r.1  CHLRE_01g038151v5  uncharacterized protein 

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Top 50 coexpressed genes to 103843581 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103843581 (bra-r.6 coexpression data)

CoexMap"103843581"


braLOC103843581 | Entrez gene ID : 103843581
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 3 1 2 1 3 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (248 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (79 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (186 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (641 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
Protein XP_009118567.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_009118567.2)
Subcellular
localization
TargetP
other 7  (predict for XP_009118567.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bra-r.6
for
103843581


bra-r.6
for
103844083


bna-r.1
for
106420137


bna-r.1
for
106400815


bna-r.1
for
125579411


ath-u.5
for
AT1G05910


ghi-r.1
for
107957233


ghi-r.1
for
107934846


ghi-r.1
for
107927447


cit-r.1
for
102614345


gma-u.5
for
100783127


gma-u.5
for
100787765


vvi-u.5
for
100242365


ppo-u.5
for
18106927


ppo-u.5
for
7491763


ppo-u.5
for
18106930


mtr-u.5
for
25492654


sly-u.5
for
101251280


sot-r.1
for
102583998


nta-r.1
for
107779945


nta-r.1
for
107792372


osa-u.5
for
4347572


zma-u.5
for
541979


tae-r.2
for
123122179


tae-r.2
for
123116555


tae-r.2
for
123112687


hvu-r.1
for
123399899


sbi-r.1
for
8059003


bdi-r.1
for
100831484


cre-r.1
for
CHLRE_01g038151v5



Ortholog ID: 7017
Species bra bra bna bna bna ath ghi ghi ghi cit gma gma vvi ppo ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103843581 LOC103844083 LOC106420137 LOC106400815 LOC125579411 AT1G05910 LOC107934846 LOC107927447 LOC107903820 LOC102614345 LOC100783127 LOC100787765 LOC100242365 LOC18106927 LOC7491763 LOC18106930 LOC25492654 LOC101251280 LOC102583998 LOC107779945 LOC107792372 LOC4347572 LOC541979 LOC123122179 LOC123116555 LOC123104414 LOC123399899 LOC8059003 LOC100831484 CHLRE_01g038151v5
Function* ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 cell division cycle protein 48-related / CDC48-like protein ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910-like ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 bromodomain protein 103 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 ATPase family AAA domain-containing protein At1g05910 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03420 Nucleotide excision repair 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103843581 103844083 106420137 106400815 125579411 837101 107934846 107927447 107903820 102614345 100783127 100787765 100242365 18106927 7491763 18106930 25492654 101251280 102583998 107779945 107792372 4347572 541979 123122179 123116555 123104414 123399899 8059003 100831484 5715509
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