Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g039750v5   uncharacterized protein 
 cre-r.1   CHLRE_01g039650v5   uncharacterized protein 
 ath-u.5   PDF1B   peptide deformylase 1B 
 gma-u.5   100527799   pep_deformylase superfamily protein 
 gma-u.5   100500424   pep-deformylase superfamily protein 
 sly-u.5   PDF1B   peptide deformylase-like protein 
 osa-u.5   4326576   peptide deformylase 1B, chloroplastic-like 
 osa-u.5   9269695   peptide deformylase 1B, chloroplastic-like 
 zma-u.5   103636114   peptide deformylase 1B, chloroplastic 
 bra-r.6   103846472   peptide deformylase 1B, chloroplastic/mitochondrial 
 vvi-u.5   100250707   peptide deformylase 1B, chloroplastic 
 ppo-u.5   7496836   peptide deformylase 1B, chloroplastic/mitochondrial 
 mtr-u.5   25498044   peptide deformylase 1B, chloroplastic 
 tae-r.2   123070194   peptide deformylase 1B, chloroplastic 
 tae-r.2   123078636   peptide deformylase 1B, chloroplastic 
 tae-r.2   123061560   peptide deformylase 1B, chloroplastic 
 hvu-r.1   123443943   peptide deformylase 1B, chloroplastic 
 ghi-r.1   107914239   peptide deformylase 1B, chloroplastic/mitochondrial 
 ghi-r.1   107897571   peptide deformylase 1B, chloroplastic/mitochondrial 
 bna-r.1   106418618   peptide deformylase 1B, chloroplastic/mitochondrial 
 bna-r.1   106372106   peptide deformylase 1B, chloroplastic/mitochondrial 
 sbi-r.1   8058210   peptide deformylase 1B, chloroplastic 
 sot-r.1   102596139   peptide deformylase 1B, chloroplastic 
 cit-r.1   102610035   peptide deformylase 1B, chloroplastic/mitochondrial 
 bdi-r.1   100821406   peptide deformylase 1B, chloroplastic 
 nta-r.1   107766294   peptide deformylase 1B, chloroplastic 
 nta-r.1   107806610   peptide deformylase 1B, chloroplastic 

close


Top 50 coexpressed genes to CHLRE_01g039750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_01g039750v5 (cre-r.1 coexpression data)

CoexMap"5715542"


creCHLRE_01g039750v5 | Entrez gene ID : 5715542      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 1 2 1 2 1 1 1 1 1 3 1 2 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018206 [list] [network] peptidyl-methionine modification  (9 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (224 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (3 genes)  IEA  
Protein XP_001690137.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3  (predict for XP_001690137.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_001690137.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g039750v5
cre-r.1
for
CHLRE_01g039650v5
ath-u.5
for
PDF1B
gma-u.5
for
100527799
gma-u.5
for
100500424
sly-u.5
for
PDF1B
osa-u.5
for
4326576
osa-u.5
for
9269695
zma-u.5
for
103636114
bra-r.6
for
103846472
vvi-u.5
for
100250707
ppo-u.5
for
7496836
mtr-u.5
for
25498044
tae-r.2
for
123070194
tae-r.2
for
123078636
tae-r.2
for
123061560
hvu-r.1
for
123443943
ghi-r.1
for
107914239
ghi-r.1
for
107897571
bna-r.1
for
106418618
bna-r.1
for
106372106
sbi-r.1
for
8058210
sot-r.1
for
102596139
cit-r.1
for
102610035
bdi-r.1
for
100821406
nta-r.1
for
107766294
nta-r.1
for
107806610


Ortholog ID: 9095
Species cre cre ath gma gma sly osa osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g039750v5 CHLRE_01g039650v5 PDF1B LOC100527799 LOC100500424 PDF1B LOC4326576 LOC9269695 LOC103636114 LOC103846472 LOC100250707 LOC7496836 LOC25498044 LOC123070194 LOC123078636 LOC123061560 LOC123443943 LOC107914239 LOC107897571 LOC106418618 LOC106372106 LOC8058210 LOC102596139 LOC102610035 LOC100821406 LOC107766294 LOC107806610
Function* uncharacterized protein uncharacterized protein peptide deformylase 1B pep_deformylase superfamily protein pep-deformylase superfamily protein peptide deformylase-like protein peptide deformylase 1B, chloroplastic-like peptide deformylase 1B, chloroplastic-like peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra00860 Porphyrin metabolism 4
bra01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00030 Pentose phosphate pathway 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 3
ghi00561 Glycerolipid metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi00480 Glutathione metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715542 5715539 831318 100527799 100500424 543648 4326576 9269695 103636114 103846472 100250707 7496836 25498044 123070194 123078636 123061560 123443943 107914239 107897571 106418618 106372106 8058210 102596139 102610035 100821406 107766294 107806610
The preparation time of this page was 0.1 [sec].