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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103636114   peptide deformylase 1B, chloroplastic 
 zma-r.6   103636114   peptide deformylase 1B, chloroplastic 
 sbi-r.1   8058210   peptide deformylase 1B, chloroplastic 
 osa-u.5   4326576   peptide deformylase 1B, chloroplastic-like 
 osa-u.5   9269695   peptide deformylase 1B, chloroplastic-like 
 tae-r.2   123070194   peptide deformylase 1B, chloroplastic 
 tae-r.2   123078636   peptide deformylase 1B, chloroplastic 
 tae-r.2   123061560   peptide deformylase 1B, chloroplastic 
 hvu-r.1   123443943   peptide deformylase 1B, chloroplastic 
 bdi-r.1   100821406   peptide deformylase 1B, chloroplastic 
 ath-u.5   PDF1B   peptide deformylase 1B 
 gma-u.5   100527799   pep_deformylase superfamily protein 
 gma-u.5   100500424   pep-deformylase superfamily protein 
 sly-u.5   PDF1B   peptide deformylase-like protein 
 bra-r.6   103846472   peptide deformylase 1B, chloroplastic/mitochondrial 
 vvi-u.5   100250707   peptide deformylase 1B, chloroplastic 
 ppo-u.5   7496836   peptide deformylase 1B, chloroplastic/mitochondrial 
 mtr-u.5   25498044   peptide deformylase 1B, chloroplastic 
 ghi-r.1   107897571   peptide deformylase 1B, chloroplastic/mitochondrial 
 ghi-r.1   107914239   peptide deformylase 1B, chloroplastic/mitochondrial 
 bna-r.1   106372106   peptide deformylase 1B, chloroplastic/mitochondrial 
 bna-r.1   106418618   peptide deformylase 1B, chloroplastic/mitochondrial 
 sot-r.1   102596139   peptide deformylase 1B, chloroplastic 
 cit-r.1   102610035   peptide deformylase 1B, chloroplastic/mitochondrial 
 nta-r.1   107806610   peptide deformylase 1B, chloroplastic 
 nta-r.1   107766294   peptide deformylase 1B, chloroplastic 
 cre-r.1   CHLRE_01g039650v5   uncharacterized protein 
 cre-r.1   CHLRE_01g039750v5   uncharacterized protein 

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Top 50 coexpressed genes to 103636114 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103636114 (zma-u.5 coexpression data)

CoexMap"103636114"


zmaLOC103636114 | Entrez gene ID : 103636114      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 2 3 1 1 1 2 1 1 1 1 1 2 2 1 1 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018206 [list] [network] peptidyl-methionine modification  (10 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (803 genes)  IEA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (2 genes)  IEA  
Protein XP_020397943.1 [sequence] [blastp]
XP_020397944.1 [sequence] [blastp]
XP_020397945.1 [sequence] [blastp]
XP_035817740.1 [sequence] [blastp]
XP_035817741.1 [sequence] [blastp]
XP_035817742.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_020397943.1)
chlo 6,  mito 4  (predict for XP_020397944.1)
chlo 6,  mito 4  (predict for XP_020397945.1)
chlo 6,  mito 4  (predict for XP_035817740.1)
chlo 6,  mito 4  (predict for XP_035817741.1)
chlo 6,  mito 4  (predict for XP_035817742.1)
Subcellular
localization
TargetP
mito 9,  chlo 3  (predict for XP_020397943.1)
mito 9,  chlo 3  (predict for XP_020397944.1)
mito 9,  chlo 3  (predict for XP_020397945.1)
mito 9,  chlo 3  (predict for XP_035817740.1)
mito 9,  chlo 3  (predict for XP_035817741.1)
mito 9,  chlo 3  (predict for XP_035817742.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103636114
zma-r.6
for
103636114
sbi-r.1
for
8058210
osa-u.5
for
4326576
osa-u.5
for
9269695
tae-r.2
for
123070194
tae-r.2
for
123078636
tae-r.2
for
123061560
hvu-r.1
for
123443943
bdi-r.1
for
100821406
ath-u.5
for
PDF1B
gma-u.5
for
100527799
gma-u.5
for
100500424
sly-u.5
for
PDF1B
bra-r.6
for
103846472
vvi-u.5
for
100250707
ppo-u.5
for
7496836
mtr-u.5
for
25498044
ghi-r.1
for
107897571
ghi-r.1
for
107914239
bna-r.1
for
106372106
bna-r.1
for
106418618
sot-r.1
for
102596139
cit-r.1
for
102610035
nta-r.1
for
107806610
nta-r.1
for
107766294
cre-r.1
for
CHLRE_01g039650v5
cre-r.1
for
CHLRE_01g039750v5


Ortholog ID: 9095
Species zma sbi osa osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre cre
Symbol LOC103636114 LOC8058210 LOC4326576 LOC9269695 LOC123070194 LOC123078636 LOC123061560 LOC123443943 LOC100821406 PDF1B LOC100527799 LOC100500424 PDF1B LOC103846472 LOC100250707 LOC7496836 LOC25498044 LOC107897571 LOC107914239 LOC106372106 LOC106418618 LOC102596139 LOC102610035 LOC107806610 LOC107766294 CHLRE_01g039650v5 CHLRE_01g039750v5
Function* peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic-like peptide deformylase 1B, chloroplastic-like peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B pep_deformylase superfamily protein pep-deformylase superfamily protein peptide deformylase-like protein peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra00860 Porphyrin metabolism 4
bra01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00030 Pentose phosphate pathway 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi00480 Glutathione metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 3
ghi00561 Glycerolipid metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103636114 8058210 4326576 9269695 123070194 123078636 123061560 123443943 100821406 831318 100527799 100500424 543648 103846472 100250707 7496836 25498044 107897571 107914239 106372106 106418618 102596139 102610035 107806610 107766294 5715539 5715542
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