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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107798780   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 nta-r.1   107817999   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like 
 sly-u.5   101245513   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 sot-r.1   102597420   uncharacterized LOC102597420 
 ath-u.5   FHY1   far-red elongated hypocotyl 1 
 gma-u.5   100795918   protein FAR-RED ELONGATED HYPOCOTYL 1 
 gma-u.5   100500150   uncharacterized LOC100500150 
 bra-r.6   103867171   protein FAR-RED ELONGATED HYPOCOTYL 1 
 bra-r.6   103865620   protein FAR-RED ELONGATED HYPOCOTYL 1 
 vvi-u.5   100264843   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ppo-u.5   7487264   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ppo-u.5   7468813   probable protein S-acyltransferase 16 
 mtr-u.5   25498504   protein FAR-RED ELONGATED HYPOCOTYL 1 
 ghi-r.1   121212259   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ghi-r.1   107943098   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ghi-r.1   107918439   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 bna-r.1   106454688   protein FAR-RED ELONGATED HYPOCOTYL 1 
 bna-r.1   BNAC04G07710D   protein FAR-RED ELONGATED HYPOCOTYL 1 
 cit-r.1   102612072   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 

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Top 50 coexpressed genes to 107798780 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107798780 (nta-r.1 coexpression data)

CoexMap"107798780"


ntaLOC107798780 | Entrez gene ID : 107798780      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit sbi osa tae hvu zma cre bdi
Paralog 2 1 1 1 2 2 1 2 1 3 2 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051457 [list] [network] maintenance of protein location in nucleus  (2 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (68 genes)  IEA  
GO CC
GO:0016607 [list] [network] nuclear speck  (5 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0061608 [list] [network] nuclear import signal receptor activity  (18 genes)  IEA  
Protein XP_016477307.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016477307.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016477307.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107798780
nta-r.1
for
107817999
sly-u.5
for
101245513
sot-r.1
for
102597420
ath-u.5
for
FHY1
gma-u.5
for
100795918
gma-u.5
for
100500150
bra-r.6
for
103867171
bra-r.6
for
103865620
vvi-u.5
for
100264843
ppo-u.5
for
7487264
ppo-u.5
for
7468813
mtr-u.5
for
25498504
ghi-r.1
for
121212259
ghi-r.1
for
107943098
ghi-r.1
for
107918439
bna-r.1
for
106454688
bna-r.1
for
BNAC04G07710D
cit-r.1
for
102612072


Ortholog ID: 12064
Species nta nta sly sot ath gma gma bra bra vvi ppo ppo mtr ghi ghi ghi bna bna cit
Symbol LOC107798780 LOC107817999 LOC101245513 LOC102597420 FHY1 LOC100795918 LOC100500150 LOC103867171 LOC103865620 LOC100264843 LOC7487264 LOC7468813 LOC25498504 LOC121212259 LOC107943098 LOC107918439 LOC106454688 BNAC04G07710D LOC102612072
Function* protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE uncharacterized LOC102597420 far-red elongated hypocotyl 1 protein FAR-RED ELONGATED HYPOCOTYL 1 uncharacterized LOC100500150 protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE probable protein S-acyltransferase 16 protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04075 Plant hormone signal transduction 2
sot00270 Cysteine and methionine metabolism 2
sot00460 Cyanoamino acid metabolism 2
sot00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107798780 107817999 101245513 102597420 5007942 100795918 100500150 103867171 103865620 100264843 7487264 7468813 25498504 121212259 107943098 107918439 106454688 106394553 102612072
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