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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487264   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ppo-r.4   7487264   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ppo-m.4   7487264   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ppo-u.5   7468813   probable protein S-acyltransferase 16 
 gma-u.5   100500150   uncharacterized LOC100500150 
 gma-u.5   100795918   protein FAR-RED ELONGATED HYPOCOTYL 1 
 mtr-u.5   25498504   protein FAR-RED ELONGATED HYPOCOTYL 1 
 ath-u.5   FHY1   far-red elongated hypocotyl 1 
 vvi-u.5   100264843   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 sly-u.5   101245513   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 

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Top 50 coexpressed genes to 7487264 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487264 (ppo-u.5 coexpression data)

CoexMap"7487264"


ppoLOC7487264 | Entrez gene ID : 7487264    
Species ppo gma mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 4 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009639 [list] [network] response to red or far red light  (47 genes)  IEA  
GO CC
GO MF
Protein XP_002309067.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002309067.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002309067.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487264

.
ppo-r.4
for
7487264

.
ppo-m.4
for
7487264

.
ppo-u.5
for
7468813

.
gma-u.5
for
100500150

.
gma-u.5
for
100795918

.
mtr-u.5
for
25498504

.
ath-u.5
for
FHY1

.
vvi-u.5
for
100264843

.
sly-u.5
for
101245513

.


Ortholog ID: 12064
Species ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna sot cit nta nta
Symbol FHY1 LOC100795918 LOC100500150 LOC101245513 LOC103865620 LOC103867171 LOC100264843 LOC7468813 LOC7487264 LOC25498504 LOC121212259 LOC107918439 LOC106454688 LOC102597420 LOC102612072 LOC107817999 LOC107798780
Function* far-red elongated hypocotyl 1 protein FAR-RED ELONGATED HYPOCOTYL 1 uncharacterized LOC100500150 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE probable protein S-acyltransferase 16 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED ELONGATED HYPOCOTYL 1 uncharacterized LOC102597420 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04075 Plant hormone signal transduction 2
sot00270 Cysteine and methionine metabolism 2
sot00460 Cyanoamino acid metabolism 2
sot00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5007942 100795918 100500150 101245513 103865620 103867171 100264843 7468813 7487264 25498504 121212259 107918439 106454688 102597420 102612072 107817999 107798780
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