Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500150   uncharacterized LOC100500150 
 gma-r.7   100500150   uncharacterized LOC100500150 
 gma-m.5   100500150   uncharacterized LOC100500150 
 gma-u.5   100795918   protein FAR-RED ELONGATED HYPOCOTYL 1 
 mtr-u.5   25498504   protein FAR-RED ELONGATED HYPOCOTYL 1 
 ppo-u.5   7487264   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 ppo-u.5   7468813   probable protein S-acyltransferase 16 
 ath-u.5   FHY1   far-red elongated hypocotyl 1 
 vvi-u.5   100264843   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 
 sly-u.5   101245513   protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE 

close


Top 50 coexpressed genes to 100500150 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100500150 (gma-u.5 coexpression data)

CoexMap"100500150"


gmaLOC100500150 | Entrez gene ID : 100500150      
Species gma mtr ppo ath vvi sly cre ghi cit hvu bdi sot bra sbi osa tae nta zma bna
Paralog 4 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051457 [list] [network] maintenance of protein location in nucleus  (4 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (71 genes)  IEA  
GO CC
GO:0016607 [list] [network] nuclear speck  (31 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0061608 [list] [network] nuclear import signal receptor activity  (38 genes)  IEA  
Protein NP_001237561.1 [sequence] [blastp]
XP_006601754.1 [sequence] [blastp]
XP_006601755.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001237561.1)
nucl 10  (predict for XP_006601754.1)
nucl 10  (predict for XP_006601755.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001237561.1)
other 8,  chlo 3  (predict for XP_006601754.1)
other 8,  chlo 3  (predict for XP_006601755.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500150

.
gma-r.7
for
100500150

.
gma-m.5
for
100500150

.
gma-u.5
for
100795918

.
mtr-u.5
for
25498504

.
ppo-u.5
for
7487264

.
ppo-u.5
for
7468813

.
ath-u.5
for
FHY1

.
vvi-u.5
for
100264843

.
sly-u.5
for
101245513

.


Ortholog ID: 12064
Species ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna sot cit nta nta
Symbol FHY1 LOC100795918 LOC100500150 LOC101245513 LOC103865620 LOC103867171 LOC100264843 LOC7468813 LOC7487264 LOC25498504 LOC121212259 LOC107918439 LOC106454688 LOC102597420 LOC102612072 LOC107817999 LOC107798780
Function* far-red elongated hypocotyl 1 protein FAR-RED ELONGATED HYPOCOTYL 1 uncharacterized LOC100500150 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE probable protein S-acyltransferase 16 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED ELONGATED HYPOCOTYL 1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED ELONGATED HYPOCOTYL 1 uncharacterized LOC102597420 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04075 Plant hormone signal transduction 2
sot00270 Cysteine and methionine metabolism 2
sot00460 Cyanoamino acid metabolism 2
sot00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5007942 100795918 100500150 101245513 103865620 103867171 100264843 7468813 7487264 25498504 121212259 107918439 106454688 102597420 102612072 107817999 107798780
The preparation time of this page was 0.3 [sec].