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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1   4349529   uncharacterized LOC4349529 
 osa-u.5   4349529   uncharacterized LOC4349529 
 osa-r.6   4349529   uncharacterized LOC4349529 
 osa-m.8   4349529   uncharacterized LOC4349529 
 osa-u.5   4351650   protein GAMETOPHYTE DEFECTIVE 1 
 osa-u.5   9271052   uncharacterized LOC9271052 
 tae-r.2   123091729   uncharacterized LOC123091729 
 tae-r.2   123086297   uncharacterized LOC123086297 
 tae-r.2   123096712   uncharacterized LOC123096712 
 hvu-r.1   123448121   uncharacterized LOC123448121 
 bdi-r.1   100830772   uncharacterized LOC100830772 
 zma-u.5   100279258   uncharacterized LOC100279258 
 sbi-r.1   8079950   uncharacterized LOC8079950 
 sbi-r.1   8072894   uncharacterized LOC8072894 
 ath-u.5   GAF1   Polymerase/histidinol phosphatase-like protein 
 gma-u.5   121172931   ubiquitin C-terminal hydrolase 13-like 
 gma-u.5   100776746   protein GAMETOPHYTE DEFECTIVE 1 
 sly-u.5   101253090   uncharacterized LOC101253090 
 bra-r.6   103851531   protein GAMETOPHYTE DEFECTIVE 1 
 bra-r.6   103845416   protein GAMETOPHYTE DEFECTIVE 1 
 vvi-u.5   100241609   protein GAMETOPHYTE DEFECTIVE 1 
 ppo-u.5   7488147   uncharacterized LOC7488147 
 mtr-u.5   11408905   uncharacterized LOC11408905 
 ghi-r.1   107906177   protein GAMETOPHYTE DEFECTIVE 1 
 ghi-r.1   107959072   protein GAMETOPHYTE DEFECTIVE 1 
 bna-r.1   106347480   protein GAMETOPHYTE DEFECTIVE 1-like 
 bna-r.1   106385719   protein GAMETOPHYTE DEFECTIVE 1-like 
 bna-r.1   106412410   protein GAMETOPHYTE DEFECTIVE 1-like 
 sot-r.1   102585350   uncharacterized LOC102585350 
 cit-r.1   102614383   protein GAMETOPHYTE DEFECTIVE 1 
 nta-r.1   107814819   uncharacterized LOC107814819 
 nta-r.1   107765292   uncharacterized LOC107765292 
 cre-r.1   CHLRE_02g088050v5   uncharacterized protein 

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Top 50 coexpressed genes to 4349529 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4349529 (osa-e.1 coexpression data)

CoexMap"4349529"


osaLOC4349529 | Entrez gene ID : 4349529      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 6 3 1 1 1 2 1 2 1 2 1 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03008 [list] [network] Ribosome biogenesis in eukaryotes (91 genes)
GO BP
GO:0008033 [list] [network] tRNA processing  (101 genes)  IEA  
GO CC
GO:0005655 [list] [network] nucleolar ribonuclease P complex  (5 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015617062.1 [sequence] [blastp]
XP_015617064.1 [sequence] [blastp]
XP_025876893.1 [sequence] [blastp]
XP_025876894.1 [sequence] [blastp]
XP_066161469.1 [sequence] [blastp]
XP_066161470.1 [sequence] [blastp]
XP_066161471.1 [sequence] [blastp]
XP_066161472.1 [sequence] [blastp]
XP_066161474.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  plas 1,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_015617062.1)
nucl 6,  plas 1,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_015617064.1)
nucl 6,  plas 1,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_025876893.1)
nucl 6,  plas 1,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_025876894.1)
nucl 6,  plas 1,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_066161469.1)
nucl 6,  plas 1,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_066161470.1)
nucl 5,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_066161471.1)
nucl 5,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_066161472.1)
nucl 5,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_066161474.1)
Subcellular
localization
TargetP
other 8  (predict for XP_015617062.1)
other 8  (predict for XP_015617064.1)
other 8  (predict for XP_025876893.1)
other 8  (predict for XP_025876894.1)
other 8  (predict for XP_066161469.1)
other 8  (predict for XP_066161470.1)
other 8  (predict for XP_066161471.1)
other 8  (predict for XP_066161472.1)
other 8  (predict for XP_066161474.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-e.1
for
4349529
osa-u.5
for
4349529
osa-r.6
for
4349529
osa-m.8
for
4349529
osa-u.5
for
4351650
osa-u.5
for
9271052
tae-r.2
for
123091729
tae-r.2
for
123086297
tae-r.2
for
123096712
hvu-r.1
for
123448121
bdi-r.1
for
100830772
zma-u.5
for
100279258
sbi-r.1
for
8079950
sbi-r.1
for
8072894
ath-u.5
for
GAF1
gma-u.5
for
121172931
gma-u.5
for
100776746
sly-u.5
for
101253090
bra-r.6
for
103851531
bra-r.6
for
103845416
vvi-u.5
for
100241609
ppo-u.5
for
7488147
mtr-u.5
for
11408905
ghi-r.1
for
107906177
ghi-r.1
for
107959072
bna-r.1
for
106347480
bna-r.1
for
106385719
bna-r.1
for
106412410
sot-r.1
for
102585350
cit-r.1
for
102614383
nta-r.1
for
107814819
nta-r.1
for
107765292
cre-r.1
for
CHLRE_02g088050v5


Ortholog ID: 7003
Species osa osa osa tae tae tae hvu bdi zma sbi sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC4349529 LOC4351650 LOC9271052 LOC123091729 LOC123086297 LOC123096712 LOC123448121 LOC100830772 LOC100279258 LOC8079950 LOC8072894 GAF1 LOC121172931 LOC100776746 LOC101253090 LOC103851531 LOC103845416 LOC100241609 LOC7488147 LOC11408905 LOC107906177 LOC107959072 LOC106385719 LOC106412410 BNAC09G35310D LOC102585350 LOC102614383 LOC107814819 LOC107765292 CHLRE_02g088050v5
Function* uncharacterized LOC4349529 protein GAMETOPHYTE DEFECTIVE 1 uncharacterized LOC9271052 uncharacterized LOC123091729 uncharacterized LOC123086297 uncharacterized LOC123096712 uncharacterized LOC123448121 uncharacterized LOC100830772 uncharacterized LOC100279258 uncharacterized LOC8079950 uncharacterized LOC8072894 Polymerase/histidinol phosphatase-like protein ubiquitin C-terminal hydrolase 13-like protein GAMETOPHYTE DEFECTIVE 1 uncharacterized LOC101253090 protein GAMETOPHYTE DEFECTIVE 1 protein GAMETOPHYTE DEFECTIVE 1 protein GAMETOPHYTE DEFECTIVE 1 uncharacterized LOC7488147 uncharacterized LOC11408905 protein GAMETOPHYTE DEFECTIVE 1 protein GAMETOPHYTE DEFECTIVE 1 protein GAMETOPHYTE DEFECTIVE 1-like protein GAMETOPHYTE DEFECTIVE 1-like protein GAMETOPHYTE DEFECTIVE 1 uncharacterized LOC102585350 protein GAMETOPHYTE DEFECTIVE 1 uncharacterized LOC107814819 uncharacterized LOC107765292 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03013 Nucleocytoplasmic transport 3
ghi03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
ghi03013 Nucleocytoplasmic transport 6
ghi03250 Viral life cycle - HIV-1 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4349529 4351650 9271052 123091729 123086297 123096712 123448121 100830772 100279258 8079950 8072894 836120 121172931 100776746 101253090 103851531 103845416 100241609 7488147 11408905 107906177 107959072 106385719 106412410 106416691 102585350 102614383 107814819 107765292 5727432
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