ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-e.1	4351513	large ribosomal subunit protein uL24z
osa-u.5	4351513	large ribosomal subunit protein uL24z
osa-r.6	4351513	large ribosomal subunit protein uL24z
osa-m.8	4351513	large ribosomal subunit protein uL24z
osa-u.5	4349791	large ribosomal subunit protein uL24z
osa-u.5	4325478	large ribosomal subunit protein uL24z
tae-r.2	123069181	60S ribosomal protein L26-1
tae-r.2	123077703	60S ribosomal protein L26-1
tae-r.2	123060594	60S ribosomal protein L26-1
hvu-r.1	123443110	60S ribosomal protein L26-1-like
bdi-r.1	100826639	60S ribosomal protein L26-1
zma-u.5	542610	60S ribosomal protein L26-1
zma-u.5	100285268	60S ribosomal protein L26-1
sbi-r.1	8073332	60S ribosomal protein L26-1
ath-u.5	AT3G49910	Translation protein SH3-like family protein
ath-u.5	AT5G67510	Translation protein SH3-like family protein
gma-u.5	100818263	60S ribosomal protein L26-1
gma-u.5	100775705	60S ribosomal protein L26-1
gma-u.5	100779956	60S ribosomal protein L26-1
sly-u.5	101246988	large ribosomal subunit protein uL24z
sly-u.5	101261182	large ribosomal subunit protein uL24z
sly-u.5	101267290	large ribosomal subunit protein uL24z
bra-r.6	103840913	60S ribosomal protein L26-1
bra-r.6	103860635	60S ribosomal protein L26-1
bra-r.6	103827745	60S ribosomal protein L26-1
vvi-u.5	100267018	60S ribosomal protein L26-1-like
vvi-u.5	100242242	large ribosomal subunit protein uL24z
ppo-u.5	7456938	60S ribosomal protein L26-1
ppo-u.5	7486328	60S ribosomal protein L26-1
ppo-u.5	18101102	60S ribosomal protein L26-1
mtr-u.5	11425151	60S ribosomal protein L26-2
mtr-u.5	11425352	60S ribosomal protein L26-1
mtr-u.5	11436692	60S ribosomal protein L26-1
ghi-r.1	107942623	60S ribosomal protein L26-1
ghi-r.1	107899345	60S ribosomal protein L26-1
bna-r.1	106451222	60S ribosomal protein L26-1
bna-r.1	106390881	60S ribosomal protein L26-1
bna-r.1	106406248	60S ribosomal protein L26-1
sot-r.1	102596561	60S ribosomal protein L26-1-like
sot-r.1	102588872	60S ribosomal protein L26-1
cit-r.1	102621144	60S ribosomal protein L26-1
nta-r.1	107801513	large ribosomal subunit protein uL24z
nta-r.1	107797218	large ribosomal subunit protein uL24z-like
nta-r.1	107829238	large ribosomal subunit protein uL24z
cre-r.1	CHLRE_01g040000v5	ribosomal protein L26

Top 50 coexpressed genes to 4351513 (osa-e.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4351513 (osa-e.1 coexpression data)

CoexMap"4351513"

[Cytoscape]

Annotation

functional annotation

KEGG

osa03010 [list] [network] Ribosome (386 genes)

GO BP

GO:0002181 [list] [network] cytoplasmic translation	(68 genes)	IEA
GO:0042273 [list] [network] ribosomal large subunit biogenesis	(85 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(132 genes)	IEA
GO:0005840 [list] [network] ribosome	(360 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(352 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1223 genes)	IEA

Protein

XP_015618223.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 4, chlo_mito 4

(predict for XP_015618223.1)

Subcellular
localization
TargetP

mito 8, chlo 3

(predict for XP_015618223.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4351513	osa-u.5 for 4351513	osa-r.6 for 4351513	osa-m.8 for 4351513	osa-u.5 for 4349791	osa-u.5 for 4325478	tae-r.2 for 123069181	tae-r.2 for 123077703	tae-r.2 for 123060594	hvu-r.1 for 123443110	bdi-r.1 for 100826639	zma-u.5 for 542610	zma-u.5 for 100285268	sbi-r.1 for 8073332	ath-u.5 for AT3G49910	ath-u.5 for AT5G67510	gma-u.5 for 100818263	gma-u.5 for 100775705	gma-u.5 for 100779956	sly-u.5 for 101246988	sly-u.5 for 101261182	sly-u.5 for 101267290	bra-r.6 for 103840913	bra-r.6 for 103860635	bra-r.6 for 103827745	vvi-u.5 for 100267018	vvi-u.5 for 100242242	ppo-u.5 for 7456938	ppo-u.5 for 7486328	ppo-u.5 for 18101102	mtr-u.5 for 11425151	mtr-u.5 for 11425352	mtr-u.5 for 11436692	ghi-r.1 for 107942623	ghi-r.1 for 107899345	bna-r.1 for 106451222	bna-r.1 for 106390881	bna-r.1 for 106406248	sot-r.1 for 102596561	sot-r.1 for 102588872	cit-r.1 for 102621144	nta-r.1 for 107801513	nta-r.1 for 107797218	nta-r.1 for 107829238	cre-r.1 for CHLRE_01g040000v5

Ortholog

Ortholog ID: 2654

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

60S ribosomal protein L26-1

Translation protein SH3-like family protein

60S ribosomal protein L26-1

putative 60S ribosomal protein L26

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1

60S ribosomal protein L26-2

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

60S ribosomal protein L26-1

large ribosomal subunit protein uL24z

large ribosomal subunit protein uL24z-like

large ribosomal subunit protein uL24z

ribosomal protein L26

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	15
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	15
tae00750	Vitamin B6 metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	15
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	17
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	13
nta00190	Oxidative phosphorylation	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	21

Expression

Expression pattern

Entrez Gene ID^*

4351513

4349791

4325478

123069181

123077703

123060594

123443110

100826639

542610

100285268

8073332

824153

836887

100818263

100775705

100788996

101246988

101261182

101267290

103840913

103860635

103827745

100267018

100242242

7456938

7486328

18101102

11425151

11425352

11436692

107924753

121215296

106451222

106390881

106402150

102596561

102588872

102621144

107801513

107826309

107831809

5715546

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	3	1	1	2	1	2	3	3	3	2	3	3	2	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4351513 (osa-e.1 coexpression data)

Top 50 enrichment test to 4351513 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**