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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110435333   E3 ubiquitin-protein ligase At3g02290-like 
 sbi-r.1   8079828   E3 ubiquitin-protein ligase At3g02290 
 sbi-r.1   8064525   E3 ubiquitin-protein ligase At3g02290 
 zma-u.5   100282797   uncharacterized LOC100282797 
 zma-u.5   100282360   protein binding protein 
 zma-u.5   100273572   uncharacterized LOC100273572 
 osa-u.5   4327238   E3 ubiquitin-protein ligase At3g02290 
 osa-u.5   4333386   E3 ubiquitin-protein ligase At3g02290 
 osa-u.5   4350962   E3 ubiquitin-protein ligase At3g02290 
 tae-r.2   123072082   E3 ubiquitin-protein ligase At3g02290 
 hvu-r.1   123444690   E3 ubiquitin-protein ligase At3g02290-like 
 hvu-r.1   123445299   E3 ubiquitin-protein ligase At3g02290-like 
 hvu-r.1   123448357   E3 ubiquitin-protein ligase At3g02290-like 
 bdi-r.1   100839977   E3 ubiquitin-protein ligase At3g02290 
 bdi-r.1   100832121   E3 ubiquitin-protein ligase At3g02290 
 bdi-r.1   100825451   E3 ubiquitin-protein ligase At3g02290 
 ath-u.5   AT3G02290   RING/U-box superfamily protein 
 ath-u.5   AT5G15790   RING/U-box superfamily protein 
 ath-u.5   AT5G38895   RING/U-box superfamily protein 
 gma-u.5   100790104   RING finger/U-box-containing protein 
 gma-u.5   100788192   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101262010   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101250758   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101252743   E3 ubiquitin-protein ligase At3g02290-like 
 bra-r.6   103870921   E3 ubiquitin-protein ligase At3g02290 
 bra-r.6   103863812   E3 ubiquitin-protein ligase At3g02290 
 vvi-u.5   100244614   E3 ubiquitin-protein ligase At3g02290 
 vvi-u.5   100247128   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   7497577   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   18097684   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   18107348   E3 ubiquitin-protein ligase At3g02290 
 mtr-u.5   25495435   E3 ubiquitin-protein ligase At3g02290 
 mtr-u.5   11421579   E3 ubiquitin-protein ligase At3g02290 
 ghi-r.1   121202922   E3 ubiquitin-protein ligase At3g02290 
 ghi-r.1   107955683   E3 ubiquitin-protein ligase At3g02290 
 ghi-r.1   107953963   E3 ubiquitin-protein ligase At3g02290 
 bna-r.1   106379049   E3 ubiquitin-protein ligase At3g02290-like 
 bna-r.1   106382857   E3 ubiquitin-protein ligase At3g02290-like 
 sot-r.1   102587162   E3 ubiquitin-protein ligase At3g02290-like 
 sot-r.1   102600289   E3 ubiquitin-protein ligase At3g02290-like 
 sot-r.1   102598476   E3 ubiquitin-protein ligase At3g02290-like 
 cit-r.1   102624444   E3 ubiquitin-protein ligase At3g02290 
 cit-r.1   102621029   E3 ubiquitin-protein ligase At3g02290 
 cit-r.1   102616991   E3 ubiquitin-protein ligase At3g02290 
 nta-r.1   107761265   E3 ubiquitin-protein ligase At3g02290-like 
 nta-r.1   107770056   E3 ubiquitin-protein ligase At3g02290 
 nta-r.1   107804994   E3 ubiquitin-protein ligase At3g02290 
 cre-r.1   CHLRE_08g371400v5   uncharacterized protein 

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Top 50 coexpressed genes to 110435333 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110435333 (sbi-r.1 coexpression data)

CoexMap"110435333"


sbiLOC110435333 | Entrez gene ID : 110435333    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 3 1 3 3 3 2 3 2 2 3 2 3 2 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
Protein XP_021316465.1 [sequence] [blastp]
XP_021316466.1 [sequence] [blastp]
XP_021316467.1 [sequence] [blastp]
XP_021316468.1 [sequence] [blastp]
XP_021316469.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316465.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316466.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316467.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316468.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316469.1)
Subcellular
localization
TargetP
other 6  (predict for XP_021316465.1)
other 6  (predict for XP_021316466.1)
other 6  (predict for XP_021316467.1)
other 6  (predict for XP_021316468.1)
other 6  (predict for XP_021316469.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110435333
sbi-r.1
for
8079828
sbi-r.1
for
8064525
zma-u.5
for
100282797
zma-u.5
for
100282360
zma-u.5
for
100273572
osa-u.5
for
4327238
osa-u.5
for
4333386
osa-u.5
for
4350962
tae-r.2
for
123072082
hvu-r.1
for
123444690
hvu-r.1
for
123445299
hvu-r.1
for
123448357
bdi-r.1
for
100839977
bdi-r.1
for
100832121
bdi-r.1
for
100825451
ath-u.5
for
AT3G02290
ath-u.5
for
AT5G15790
ath-u.5
for
AT5G38895
gma-u.5
for
100790104
gma-u.5
for
100788192
sly-u.5
for
101262010
sly-u.5
for
101250758
sly-u.5
for
101252743
bra-r.6
for
103870921
bra-r.6
for
103863812
vvi-u.5
for
100244614
vvi-u.5
for
100247128
ppo-u.5
for
7497577
ppo-u.5
for
18097684
ppo-u.5
for
18107348
mtr-u.5
for
25495435
mtr-u.5
for
11421579
ghi-r.1
for
121202922
ghi-r.1
for
107955683
ghi-r.1
for
107953963
bna-r.1
for
106379049
bna-r.1
for
106382857
sot-r.1
for
102587162
sot-r.1
for
102600289
sot-r.1
for
102598476
cit-r.1
for
102624444
cit-r.1
for
102621029
cit-r.1
for
102616991
nta-r.1
for
107761265
nta-r.1
for
107770056
nta-r.1
for
107804994
cre-r.1
for
CHLRE_08g371400v5


Ortholog ID: 1055
Species sbi sbi sbi zma zma zma osa osa osa tae tae hvu hvu bdi bdi bdi ath ath gma gma gma sly sly sly bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre
Symbol LOC110435333 LOC8079828 LOC8064525 LOC100282797 LOC100273572 LOC103655759 LOC4327238 LOC4333386 LOC4350962 LOC123172610 LOC123086083 LOC123445299 LOC123448357 LOC100839977 LOC100832121 LOC100825451 AT3G02290 AT5G38895 LOC100790104 LOC100790543 LOC100777068 LOC101262010 LOC101250758 LOC101252743 LOC103863812 LOC100244614 LOC100247128 LOC7497577 LOC18097684 LOC25495435 LOC11421579 LOC107953963 LOC107954765 LOC106379049 LOC106382857 LOC106407192 LOC102587162 LOC102600289 LOC102598476 LOC102624444 LOC102621029 LOC102616991 LOC107804994 LOC107810564 LOC107824143 CHLRE_08g371400v5
Function* E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 uncharacterized LOC100282797 uncharacterized LOC100273572 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 RING/U-box superfamily protein RING/U-box superfamily protein RING finger/U-box-containing protein RING-H2 finger protein E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00260 Glycine, serine and threonine metabolism 4
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi01240 Biosynthesis of cofactors 3
sbi00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00310 Lysine degradation 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
zma04136 Autophagy - other 2
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04141 Protein processing in endoplasmic reticulum 5
bdi04144 Endocytosis 4
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
sly00600 Sphingolipid metabolism 2
sly04142 Lysosome 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra00920 Sulfur metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 8
ghi00190 Oxidative phosphorylation 4
ghi00310 Lysine degradation 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00310 Lysine degradation 3
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110435333 8079828 8064525 100282797 100273572 103655759 4327238 4333386 4350962 123172610 123086083 123445299 123448357 100839977 100832121 100825451 821179 833881 100790104 100790543 100777068 101262010 101250758 101252743 103863812 100244614 100247128 7497577 18097684 25495435 11421579 107953963 107954765 106379049 106382857 106407192 102587162 102600289 102598476 102624444 102621029 102616991 107804994 107810564 107824143 5726852
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