Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102621029   E3 ubiquitin-protein ligase At3g02290 
 cit-r.1   102616991   E3 ubiquitin-protein ligase At3g02290 
 cit-r.1   102624444   E3 ubiquitin-protein ligase At3g02290 
 ath-u.5   AT3G02290   RING/U-box superfamily protein 
 ath-u.5   AT5G15790   RING/U-box superfamily protein 
 ath-u.5   AT5G38895   RING/U-box superfamily protein 
 bra-r.6   103846386   E3 ubiquitin-protein ligase At3g02290 
 ghi-r.1   107898982   E3 ubiquitin-protein ligase At3g02290 
 ghi-r.1   107946384   E3 ubiquitin-protein ligase At3g02290 
 bna-r.1   125594175   E3 ubiquitin-protein ligase At3g02290-like 
 bna-r.1   106424776   E3 ubiquitin-protein ligase At3g02290 
 bna-r.1   106407192   E3 ubiquitin-protein ligase At3g02290 
 gma-u.5   100790543   RING-H2 finger protein 
 gma-u.5   100790104   RING finger/U-box-containing protein 
 vvi-u.5   100247128   E3 ubiquitin-protein ligase At3g02290 
 vvi-u.5   100244614   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   18097684   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   7482829   E3 ubiquitin-protein ligase At3g02290 
 mtr-u.5   11421579   E3 ubiquitin-protein ligase At3g02290 
 mtr-u.5   25495435   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101250758   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101252743   E3 ubiquitin-protein ligase At3g02290-like 
 sly-u.5   101262010   E3 ubiquitin-protein ligase At3g02290 
 sot-r.1   102587162   E3 ubiquitin-protein ligase At3g02290-like 
 sot-r.1   102598476   E3 ubiquitin-protein ligase At3g02290-like 
 sot-r.1   102600289   E3 ubiquitin-protein ligase At3g02290-like 
 nta-r.1   107824143   E3 ubiquitin-protein ligase At3g02290 
 nta-r.1   107816024   E3 ubiquitin-protein ligase At3g02290 
 nta-r.1   107810564   E3 ubiquitin-protein ligase At3g02290 
 osa-u.5   4350962   E3 ubiquitin-protein ligase At3g02290 
 osa-u.5   4333386   E3 ubiquitin-protein ligase At3g02290 
 osa-u.5   4327238   E3 ubiquitin-protein ligase At3g02290 
 zma-u.5   103628526   E3 ubiquitin-protein ligase 
 zma-u.5   103655759   E3 ubiquitin-protein ligase ATL4 
 zma-u.5   100282797   uncharacterized LOC100282797 
 tae-r.2   123063180   E3 ubiquitin-protein ligase At3g02290 
 hvu-r.1   123448357   E3 ubiquitin-protein ligase At3g02290-like 
 hvu-r.1   123444690   E3 ubiquitin-protein ligase At3g02290-like 
 sbi-r.1   8079828   E3 ubiquitin-protein ligase At3g02290 
 sbi-r.1   8064525   E3 ubiquitin-protein ligase At3g02290 
 sbi-r.1   110435333   E3 ubiquitin-protein ligase At3g02290-like 
 bdi-r.1   100825451   E3 ubiquitin-protein ligase At3g02290 
 bdi-r.1   100832121   E3 ubiquitin-protein ligase At3g02290 
 bdi-r.1   100839977   E3 ubiquitin-protein ligase At3g02290 
 cre-r.1   CHLRE_08g371400v5   uncharacterized protein 

close


Top 50 coexpressed genes to 102621029 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102621029 (cit-r.1 coexpression data)

CoexMap"102621029"


citLOC102621029 | Entrez gene ID : 102621029    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 1 2 3 2 2 2 2 3 3 3 3 3 1 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (249 genes)  IEA  
Protein XP_006484244.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  extr 1  (predict for XP_006484244.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_006484244.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102621029
cit-r.1
for
102616991
cit-r.1
for
102624444
ath-u.5
for
AT3G02290
ath-u.5
for
AT5G15790
ath-u.5
for
AT5G38895
bra-r.6
for
103846386
ghi-r.1
for
107898982
ghi-r.1
for
107946384
bna-r.1
for
125594175
bna-r.1
for
106424776
bna-r.1
for
106407192
gma-u.5
for
100790543
gma-u.5
for
100790104
vvi-u.5
for
100247128
vvi-u.5
for
100244614
ppo-u.5
for
18097684
ppo-u.5
for
7482829
mtr-u.5
for
11421579
mtr-u.5
for
25495435
sly-u.5
for
101250758
sly-u.5
for
101252743
sly-u.5
for
101262010
sot-r.1
for
102587162
sot-r.1
for
102598476
sot-r.1
for
102600289
nta-r.1
for
107824143
nta-r.1
for
107816024
nta-r.1
for
107810564
osa-u.5
for
4350962
osa-u.5
for
4333386
osa-u.5
for
4327238
zma-u.5
for
103628526
zma-u.5
for
103655759
zma-u.5
for
100282797
tae-r.2
for
123063180
hvu-r.1
for
123448357
hvu-r.1
for
123444690
sbi-r.1
for
8079828
sbi-r.1
for
8064525
sbi-r.1
for
110435333
bdi-r.1
for
100825451
bdi-r.1
for
100832121
bdi-r.1
for
100839977
cre-r.1
for
CHLRE_08g371400v5


Ortholog ID: 1055
Species cit cit cit ath ath bra ghi ghi bna bna bna gma gma gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC102621029 LOC102616991 LOC102624444 AT3G02290 AT5G38895 LOC103863812 LOC107954765 LOC107953963 LOC106407192 LOC106382857 LOC106379049 LOC100790543 LOC100790104 LOC100777068 LOC100247128 LOC100244614 LOC18097684 LOC7497577 LOC11421579 LOC25495435 LOC101250758 LOC101252743 LOC101262010 LOC102587162 LOC102598476 LOC102600289 LOC107824143 LOC107810564 LOC107804994 LOC4350962 LOC4333386 LOC4327238 LOC103655759 LOC100282797 LOC100273572 LOC123086083 LOC123172610 LOC123448357 LOC123445299 LOC8079828 LOC8064525 LOC110435333 LOC100825451 LOC100832121 LOC100839977 CHLRE_08g371400v5
Function* E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like RING-H2 finger protein RING finger/U-box-containing protein E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase ATL4 uncharacterized LOC100282797 uncharacterized LOC100273572 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00310 Lysine degradation 3
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra00920 Sulfur metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 8
ghi00190 Oxidative phosphorylation 4
ghi00310 Lysine degradation 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
sly00600 Sphingolipid metabolism 2
sly04142 Lysosome 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00310 Lysine degradation 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
zma04136 Autophagy - other 2
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00260 Glycine, serine and threonine metabolism 4
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi01240 Biosynthesis of cofactors 3
sbi00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04141 Protein processing in endoplasmic reticulum 5
bdi04144 Endocytosis 4
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102621029 102616991 102624444 821179 833881 103863812 107954765 107953963 106407192 106382857 106379049 100790543 100790104 100777068 100247128 100244614 18097684 7497577 11421579 25495435 101250758 101252743 101262010 102587162 102598476 102600289 107824143 107810564 107804994 4350962 4333386 4327238 103655759 100282797 100273572 123086083 123172610 123448357 123445299 8079828 8064525 110435333 100825451 100832121 100839977 5726852
The preparation time of this page was 1.3 [sec].