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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110435333   E3 ubiquitin-protein ligase At3g02290-like 
 zma-u.5   100282797   uncharacterized LOC100282797 
 zma-u.5   100282360   protein binding protein 
 zma-u.5   100273572   uncharacterized LOC100273572 
 osa-u.5   4327238   E3 ubiquitin-protein ligase At3g02290 
 osa-u.5   4333386   E3 ubiquitin-protein ligase At3g02290 
 osa-u.5   4350962   E3 ubiquitin-protein ligase At3g02290 
 ath-u.5   AT3G02290   RING/U-box superfamily protein 
 ath-u.5   AT5G15790   RING/U-box superfamily protein 
 ath-u.5   AT5G38895   RING/U-box superfamily protein 
 gma-u.5   100790104   RING finger/U-box-containing protein 
 gma-u.5   100788192   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101262010   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101250758   E3 ubiquitin-protein ligase At3g02290 
 sly-u.5   101252743   E3 ubiquitin-protein ligase At3g02290-like 
 vvi-u.5   100244614   E3 ubiquitin-protein ligase At3g02290 
 vvi-u.5   100247128   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   7497577   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   18097684   E3 ubiquitin-protein ligase At3g02290 
 ppo-u.5   18107348   E3 ubiquitin-protein ligase At3g02290 
 mtr-u.5   25495435   E3 ubiquitin-protein ligase At3g02290 
 mtr-u.5   11421579   E3 ubiquitin-protein ligase At3g02290 

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Top 50 coexpressed genes to 110435333 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110435333 (sbi-r.1 coexpression data)

CoexMap"110435333"


sbiLOC110435333 | Entrez gene ID : 110435333    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 2 3 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
Protein XP_021316465.1 [sequence] [blastp]
XP_021316466.1 [sequence] [blastp]
XP_021316467.1 [sequence] [blastp]
XP_021316468.1 [sequence] [blastp]
XP_021316469.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316465.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316466.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316467.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316468.1)
nucl 6,  chlo 2,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_021316469.1)
Subcellular
localization
TargetP
other 6  (predict for XP_021316465.1)
other 6  (predict for XP_021316466.1)
other 6  (predict for XP_021316467.1)
other 6  (predict for XP_021316468.1)
other 6  (predict for XP_021316469.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110435333

.
zma-u.5
for
100282797

.
zma-u.5
for
100282360

.
zma-u.5
for
100273572

.
osa-u.5
for
4327238

.
osa-u.5
for
4333386

.
osa-u.5
for
4350962

.
ath-u.5
for
AT3G02290

.
ath-u.5
for
AT5G15790

.
ath-u.5
for
AT5G38895

.
gma-u.5
for
100790104

.
gma-u.5
for
100788192

.
sly-u.5
for
101262010

.
sly-u.5
for
101250758

.
sly-u.5
for
101252743

.
vvi-u.5
for
100244614

.
vvi-u.5
for
100247128

.
ppo-u.5
for
7497577

.
ppo-u.5
for
18097684

.
ppo-u.5
for
18107348

.
mtr-u.5
for
25495435

.
mtr-u.5
for
11421579

.


Ortholog ID: 1055
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G38895 LOC100790543 LOC100790104 LOC101252743 LOC101262010 LOC4327238 LOC4333386 LOC103655759 LOC100273572 LOC103863812 LOC100247128 LOC100244614 LOC18097684 LOC7497577 LOC25495435 LOC11421579 LOC123172610 LOC123086083 LOC123448357 LOC123445299 LOC107953963 LOC106382857 LOC106407192 CHLRE_08g371400v5 LOC110435333 LOC8064525 LOC102587162 LOC102598476 LOC102621029 LOC102616991 LOC100839977 LOC100825451 LOC107810564 LOC107824143
Function* RING/U-box superfamily protein RING-H2 finger protein RING finger/U-box-containing protein E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase ATL4 uncharacterized LOC100273572 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 uncharacterized protein E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290-like E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
sly00600 Sphingolipid metabolism 2
sly04142 Lysosome 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
zma04136 Autophagy - other 2
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra00920 Sulfur metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 8
ghi00190 Oxidative phosphorylation 4
ghi00310 Lysine degradation 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna01240 Biosynthesis of cofactors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00260 Glycine, serine and threonine metabolism 4
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi01240 Biosynthesis of cofactors 3
sbi00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00310 Lysine degradation 3
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833881 100790543 100790104 101252743 101262010 4327238 4333386 103655759 100273572 103863812 100247128 100244614 18097684 7497577 25495435 11421579 123172610 123086083 123448357 123445299 107953963 106382857 106407192 5726852 110435333 8064525 102587162 102598476 102621029 102616991 100839977 100825451 107810564 107824143
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