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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8067794   mediator of RNA polymerase II transcription subunit 21 
 zma-u.5   100383822   uncharacterized LOC100383822 
 osa-u.5   4344610   mediator of RNA polymerase II transcription subunit 21 
 tae-r.2   123168305   mediator of RNA polymerase II transcription subunit 21 
 tae-r.2   123159810   mediator of RNA polymerase II transcription subunit 21 
 tae-r.2   123147442   mediator of RNA polymerase II transcription subunit 21 
 hvu-r.1   123411304   mediator of RNA polymerase II transcription subunit 21 
 bdi-r.1   100827181   mediator of RNA polymerase II transcription subunit 21 
 ath-u.5   MED21   mediator 21 
 gma-u.5   100306480   uncharacterized LOC100306480 
 sly-u.5   101256647   mediator of RNA polymerase II transcription subunit 21 
 bra-r.6   103839814   mediator of RNA polymerase II transcription subunit 21 
 ppo-u.5   7458535   mediator of RNA polymerase II transcription subunit 21 
 mtr-u.5   25498057   mediator of RNA polymerase II transcription subunit 21 
 ghi-r.1   107901952   mediator of RNA polymerase II transcription subunit 21 
 ghi-r.1   107961989   mediator of RNA polymerase II transcription subunit 21 
 bna-r.1   106416181   mediator of RNA polymerase II transcription subunit 21 
 bna-r.1   106366885   mediator of RNA polymerase II transcription subunit 21 
 sot-r.1   102592456   mediator of RNA polymerase II transcription subunit 21 
 cit-r.1   102613901   mediator of RNA polymerase II transcription subunit 21 
 nta-r.1   107799049   mediator of RNA polymerase II transcription subunit 21-like 
 nta-r.1   107789103   mediator of RNA polymerase II transcription subunit 21 
 nta-r.1   107811605   mediator of RNA polymerase II transcription subunit 21 

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Top 50 coexpressed genes to 8067794 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8067794 (sbi-r.1 coexpression data)

CoexMap"8067794"


sbiLOC8067794 | Entrez gene ID : 8067794      
Species sbi zma osa tae hvu bdi ath gma sly bra ppo mtr ghi bna sot cit nta cre vvi
Paralog 1 1 1 3 1 1 1 1 1 1 1 1 2 2 1 1 3 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (37 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (113 genes)  IEA  
Protein XP_002445011.1 [sequence] [blastp]
XP_021320992.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_E.R. 2,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_002445011.1)
cyto 4,  chlo 3,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_021320992.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002445011.1)
other 6  (predict for XP_021320992.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8067794
zma-u.5
for
100383822
osa-u.5
for
4344610
tae-r.2
for
123168305
tae-r.2
for
123159810
tae-r.2
for
123147442
hvu-r.1
for
123411304
bdi-r.1
for
100827181
ath-u.5
for
MED21
gma-u.5
for
100306480
sly-u.5
for
101256647
bra-r.6
for
103839814
ppo-u.5
for
7458535
mtr-u.5
for
25498057
ghi-r.1
for
107901952
ghi-r.1
for
107961989
bna-r.1
for
106416181
bna-r.1
for
106366885
sot-r.1
for
102592456
cit-r.1
for
102613901
nta-r.1
for
107799049
nta-r.1
for
107789103
nta-r.1
for
107811605


Ortholog ID: 10166
Species sbi zma osa tae tae tae hvu bdi ath gma sly bra ppo mtr ghi ghi bna bna sot cit nta nta nta
Symbol LOC8067794 LOC100383822 LOC4344610 LOC123168305 LOC123159810 LOC123147442 LOC123411304 LOC100827181 MED21 LOC100306480 LOC101256647 LOC103839814 LOC7458535 LOC25498057 LOC107901952 LOC107961989 LOC106416181 LOC106366885 LOC102592456 LOC102613901 LOC107799049 LOC107789103 LOC107811605
Function* mediator of RNA polymerase II transcription subunit 21 uncharacterized LOC100383822 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator 21 uncharacterized LOC100306480 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21-like mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03008 Ribosome biogenesis in eukaryotes 2
tae03083 Polycomb repressive complex 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00900 Terpenoid backbone biosynthesis 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8067794 100383822 4344610 123168305 123159810 123147442 123411304 100827181 825815 100306480 101256647 103839814 7458535 25498057 107901952 107961989 106416181 106366885 102592456 102613901 107799049 107789103 107811605
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