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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107799049   mediator of RNA polymerase II transcription subunit 21-like 
 nta-r.1   107811605   mediator of RNA polymerase II transcription subunit 21 
 nta-r.1   107789103   mediator of RNA polymerase II transcription subunit 21 
 sly-u.5   101256647   mediator of RNA polymerase II transcription subunit 21 
 sot-r.1   102592456   mediator of RNA polymerase II transcription subunit 21 
 ath-u.5   MED21   mediator 21 
 gma-u.5   100306480   uncharacterized LOC100306480 
 bra-r.6   103839814   mediator of RNA polymerase II transcription subunit 21 
 ppo-u.5   7458535   mediator of RNA polymerase II transcription subunit 21 
 mtr-u.5   25498057   mediator of RNA polymerase II transcription subunit 21 
 ghi-r.1   107901952   mediator of RNA polymerase II transcription subunit 21 
 ghi-r.1   107961989   mediator of RNA polymerase II transcription subunit 21 
 bna-r.1   106366885   mediator of RNA polymerase II transcription subunit 21 
 bna-r.1   106416181   mediator of RNA polymerase II transcription subunit 21 
 cit-r.1   102613901   mediator of RNA polymerase II transcription subunit 21 
 osa-u.5   4344610   mediator of RNA polymerase II transcription subunit 21 
 zma-u.5   100383822   uncharacterized LOC100383822 
 tae-r.2   123147442   mediator of RNA polymerase II transcription subunit 21 
 tae-r.2   123168305   mediator of RNA polymerase II transcription subunit 21 
 tae-r.2   123159810   mediator of RNA polymerase II transcription subunit 21 
 hvu-r.1   123411304   mediator of RNA polymerase II transcription subunit 21 
 sbi-r.1   8067794   mediator of RNA polymerase II transcription subunit 21 
 bdi-r.1   100827181   mediator of RNA polymerase II transcription subunit 21 

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Top 50 coexpressed genes to 107799049 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107799049 (nta-r.1 coexpression data)

CoexMap"107799049"


ntaLOC107799049 | Entrez gene ID : 107799049      
Species nta sly sot ath gma bra ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre vvi
Paralog 3 1 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (712 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (82 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (227 genes)  IEA  
Protein XP_016477601.1 [sequence] [blastp]
XP_016477602.1 [sequence] [blastp]
XP_016477603.1 [sequence] [blastp]
XP_016477604.1 [sequence] [blastp]
XP_016477605.1 [sequence] [blastp]
XP_016477606.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  cyto 1  (predict for XP_016477601.1)
chlo 4,  mito 4,  cyto 1  (predict for XP_016477602.1)
chlo 4,  mito 4,  cyto 1  (predict for XP_016477603.1)
chlo 4,  mito 4,  cyto 1  (predict for XP_016477604.1)
mito 5,  chlo 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016477605.1)
mito 5,  chlo 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016477606.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_016477601.1)
scret 8  (predict for XP_016477602.1)
scret 8  (predict for XP_016477603.1)
scret 8  (predict for XP_016477604.1)
scret 9  (predict for XP_016477605.1)
scret 9  (predict for XP_016477606.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107799049
nta-r.1
for
107811605
nta-r.1
for
107789103
sly-u.5
for
101256647
sot-r.1
for
102592456
ath-u.5
for
MED21
gma-u.5
for
100306480
bra-r.6
for
103839814
ppo-u.5
for
7458535
mtr-u.5
for
25498057
ghi-r.1
for
107901952
ghi-r.1
for
107961989
bna-r.1
for
106366885
bna-r.1
for
106416181
cit-r.1
for
102613901
osa-u.5
for
4344610
zma-u.5
for
100383822
tae-r.2
for
123147442
tae-r.2
for
123168305
tae-r.2
for
123159810
hvu-r.1
for
123411304
sbi-r.1
for
8067794
bdi-r.1
for
100827181


Ortholog ID: 10166
Species nta nta nta sly sot ath gma bra ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107799049 LOC107811605 LOC107789103 LOC101256647 LOC102592456 MED21 LOC100306480 LOC103839814 LOC7458535 LOC25498057 LOC107901952 LOC107961989 LOC106366885 LOC106416181 LOC102613901 LOC4344610 LOC100383822 LOC123147442 LOC123168305 LOC123159810 LOC123411304 LOC8067794 LOC100827181
Function* mediator of RNA polymerase II transcription subunit 21-like mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator 21 uncharacterized LOC100306480 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 uncharacterized LOC100383822 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00900 Terpenoid backbone biosynthesis 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03008 Ribosome biogenesis in eukaryotes 2
tae03083 Polycomb repressive complex 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107799049 107811605 107789103 101256647 102592456 825815 100306480 103839814 7458535 25498057 107901952 107961989 106366885 106416181 102613901 4344610 100383822 123147442 123168305 123159810 123411304 8067794 100827181
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