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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106366885  mediator of RNA polymerase II transcription subunit 21 
 bna-r.1  106416181  mediator of RNA polymerase II transcription subunit 21 
 bra-r.6  103839814  mediator of RNA polymerase II transcription subunit 21 
 ath-u.5  MED21  mediator 21 
 ghi-r.1  107901952  mediator of RNA polymerase II transcription subunit 21 
 ghi-r.1  107961989  mediator of RNA polymerase II transcription subunit 21 
 cit-r.1  102613901  mediator of RNA polymerase II transcription subunit 21 
 gma-u.5  100306480  uncharacterized LOC100306480 
 ppo-u.5  7458535  mediator of RNA polymerase II transcription subunit 21 
 mtr-u.5  25498057  mediator of RNA polymerase II transcription subunit 21 
 sly-u.5  101256647  mediator of RNA polymerase II transcription subunit 21 
 sot-r.1  102592456  mediator of RNA polymerase II transcription subunit 21 
 nta-r.1  107811605  mediator of RNA polymerase II transcription subunit 21 
 nta-r.1  107789103  mediator of RNA polymerase II transcription subunit 21 
 nta-r.1  107799049  mediator of RNA polymerase II transcription subunit 21-like 
 osa-u.5  4344610  mediator of RNA polymerase II transcription subunit 21 
 zma-u.5  100383822  uncharacterized LOC100383822 
 tae-r.2  123159810  mediator of RNA polymerase II transcription subunit 21 
 tae-r.2  123168305  mediator of RNA polymerase II transcription subunit 21 
 tae-r.2  123147442  mediator of RNA polymerase II transcription subunit 21 
 hvu-r.1  123411304  mediator of RNA polymerase II transcription subunit 21 
 sbi-r.1  8067794  mediator of RNA polymerase II transcription subunit 21 
 bdi-r.1  100827181  mediator of RNA polymerase II transcription subunit 21 

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Top 50 coexpressed genes to 106366885 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106366885 (bna-r.1 coexpression data)

CoexMap"106366885"


bnaLOC106366885 | Entrez gene ID : 106366885
Species bna bra ath ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 2 1 1 2 1 1 1 1 1 1 3 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (379 genes)  IEA  
Protein XP_013662013.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_E.R. 2,  nucl 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_013662013.2)
Subcellular
localization
TargetP
other 2  (predict for XP_013662013.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106366885


bna-r.1
for
106416181


bra-r.6
for
103839814


ath-u.5
for
MED21


ghi-r.1
for
107901952


ghi-r.1
for
107961989


cit-r.1
for
102613901


gma-u.5
for
100306480


ppo-u.5
for
7458535


mtr-u.5
for
25498057


sly-u.5
for
101256647


sot-r.1
for
102592456


nta-r.1
for
107811605


nta-r.1
for
107789103


nta-r.1
for
107799049


osa-u.5
for
4344610


zma-u.5
for
100383822


tae-r.2
for
123159810


tae-r.2
for
123168305


tae-r.2
for
123147442


hvu-r.1
for
123411304


sbi-r.1
for
8067794


bdi-r.1
for
100827181



Ortholog ID: 10166
Species bna bna bra ath ghi ghi cit gma ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106366885 LOC106416181 LOC103839814 MED21 LOC107901952 LOC107961989 LOC102613901 LOC100306480 LOC7458535 LOC25498057 LOC101256647 LOC102592456 LOC107811605 LOC107789103 LOC107799049 LOC4344610 LOC100383822 LOC123159810 LOC123168305 LOC123147442 LOC123411304 LOC8067794 LOC100827181
Function* mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 uncharacterized LOC100306480 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21-like mediator of RNA polymerase II transcription subunit 21 uncharacterized LOC100383822 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03008 Ribosome biogenesis in eukaryotes 2
tae03083 Polycomb repressive complex 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00900 Terpenoid backbone biosynthesis 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106366885 106416181 103839814 825815 107901952 107961989 102613901 100306480 7458535 25498057 101256647 102592456 107811605 107789103 107799049 4344610 100383822 123159810 123168305 123147442 123411304 8067794 100827181
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