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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   GRF2   growth-regulating factor 2 
 ath-u.5   GRF2   growth-regulating factor 2 
 ath-r.7   GRF2   growth-regulating factor 2 
 ath-m.9   GRF2   growth-regulating factor 2 
 ath-e.2   GRF2   growth-regulating factor 2 
 ath-m.4.bio   GRF2   growth-regulating factor 2 
 ath-m.4.hor   GRF2   growth-regulating factor 2 
 ath-m.4.str   GRF2   growth-regulating factor 2 
 ath-m.4.tis   GRF2   growth-regulating factor 2 
 ath-u.5   GRF1   growth-regulating factor 1 
 bra-r.6   103862578   growth-regulating factor 2 
 bra-r.6   103858395   growth-regulating factor 1 
 bra-r.6   103858126   growth-regulating factor 2 
 bna-r.1   106426792   growth-regulating factor 2-like 
 bna-r.1   106407512   growth-regulating factor 2-like 
 bna-r.1   106389497   growth-regulating factor 1 
 ghi-r.1   107951424   growth-regulating factor 1 
 ghi-r.1   107905164   growth-regulating factor 1 
 ghi-r.1   107905212   growth-regulating factor 1 
 cit-r.1   102618741   growth-regulating factor 1 
 gma-u.5   GRF21   growth-regulating factor 
 gma-u.5   GRF19   growth-regulating factor 
 gma-u.5   GRF18   growth-regulating factor 
 vvi-u.5   100853530   growth-regulating factor 1 
 vvi-u.5   100260890   growth-regulating factor 1 
 ppo-u.5   7497735   growth-regulating factor 1 
 ppo-u.5   7472639   growth-regulating factor 6-like 
 ppo-u.5   7497312   growth-regulating factor 1 
 mtr-u.5   25482044   growth-regulating factor 1 
 sly-u.5   101244049   growth-regulating factor 2-like 
 sly-u.5   101252681   growth-regulating factor 1-like 
 sot-r.1   102595967   growth-regulating factor 1-like 
 sot-r.1   102582107   growth-regulating factor 1-like 
 nta-r.1   107764760   growth-regulating factor 1 
 nta-r.1   107763641   growth-regulating factor 1-like 
 nta-r.1   107760271   growth-regulating factor 1-like 
 osa-u.5   4333990   growth-regulating factor 6-like 
 osa-u.5   9268363   growth-regulating factor 7-like 
 zma-u.5   100191470   uncharacterized LOC100191470 
 zma-u.5   100285734   uncharacterized LOC100285734 
 tae-r.2   123095990   growth-regulating factor 6 
 tae-r.2   123087001   growth-regulating factor 6 
 tae-r.2   123090965   growth-regulating factor 6 
 hvu-r.1   123447656   growth-regulating factor 6-like 
 sbi-r.1   8060535   growth-regulating factor 6 
 bdi-r.1   100833132   growth-regulating factor 6 

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Top 50 coexpressed genes to GRF2 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GRF2 (ath-m.4.lig coexpression data)

CoexMap"829930"


athGRF2 | Entrez gene ID : 829930      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 3 2 3 1 2 2 3 2 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008285 [list] [network] negative regulation of cell population proliferation  (42 genes)  IMP  
GO:0006351 [list] [network] DNA-templated transcription  (160 genes)  IEA  
GO:0048366 [list] [network] leaf development  (371 genes)  IGI  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM ISS  
GO MF
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_195488.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_195488.2)
Subcellular
localization
TargetP
other 8  (predict for NP_195488.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
GRF2
ath-u.5
for
GRF2
ath-r.7
for
GRF2
ath-m.9
for
GRF2
ath-e.2
for
GRF2
ath-m.4.bio
for
GRF2
ath-m.4.hor
for
GRF2
ath-m.4.str
for
GRF2
ath-m.4.tis
for
GRF2
ath-u.5
for
GRF1
bra-r.6
for
103862578
bra-r.6
for
103858395
bra-r.6
for
103858126
bna-r.1
for
106426792
bna-r.1
for
106407512
bna-r.1
for
106389497
ghi-r.1
for
107951424
ghi-r.1
for
107905164
ghi-r.1
for
107905212
cit-r.1
for
102618741
gma-u.5
for
GRF21
gma-u.5
for
GRF19
gma-u.5
for
GRF18
vvi-u.5
for
100853530
vvi-u.5
for
100260890
ppo-u.5
for
7497735
ppo-u.5
for
7472639
ppo-u.5
for
7497312
mtr-u.5
for
25482044
sly-u.5
for
101244049
sly-u.5
for
101252681
sot-r.1
for
102595967
sot-r.1
for
102582107
nta-r.1
for
107764760
nta-r.1
for
107763641
nta-r.1
for
107760271
osa-u.5
for
4333990
osa-u.5
for
9268363
zma-u.5
for
100191470
zma-u.5
for
100285734
tae-r.2
for
123095990
tae-r.2
for
123087001
tae-r.2
for
123090965
hvu-r.1
for
123447656
sbi-r.1
for
8060535
bdi-r.1
for
100833132


Ortholog ID: 3199
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi
Symbol GRF2 GRF1 LOC103862578 LOC103858395 LOC103858126 LOC106426792 LOC106407512 LOC125584397 LOC107941922 LOC121202961 LOC107938334 LOC102618741 GRF21 GRF18 GRF22 LOC100853530 LOC100260890 LOC7497735 LOC7497312 LOC7464777 LOC25482044 LOC101244049 LOC101252681 LOC102595967 LOC102582107 LOC107764760 LOC107760271 LOC107808379 LOC4333990 LOC9268363 LOC100191470 LOC100285734 LOC123095990 LOC123087001 LOC123090965 LOC123447656 LOC8060535 LOC100833132
Function* growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 2 growth-regulating factor 2-like growth-regulating factor 2-like growth-regulating factor 1-like growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor growth-regulating factor growth-regulating factor growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 2-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1 growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 6-like growth-regulating factor 7-like uncharacterized LOC100191470 uncharacterized LOC100285734 growth-regulating factor 6 growth-regulating factor 6 growth-regulating factor 6 growth-regulating factor 6-like growth-regulating factor 6 growth-regulating factor 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829930 816815 103862578 103858395 103858126 106426792 106407512 125584397 107941922 121202961 107938334 102618741 100807610 100818860 100807080 100853530 100260890 7497735 7497312 7464777 25482044 101244049 101252681 102595967 102582107 107764760 107760271 107808379 4333990 9268363 100191470 100285734 123095990 123087001 123090965 123447656 8060535 100833132
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