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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7497735   growth-regulating factor 1 
 ppo-r.4   7497735   growth-regulating factor 1 
 ppo-m.4   7497735   growth-regulating factor 1 
 ppo-u.5   7472639   growth-regulating factor 6-like 
 ppo-u.5   7464777   growth-regulating factor 1 
 ppo-u.5   7497312   growth-regulating factor 1 
 gma-u.5   GRF18   growth-regulating factor 
 gma-u.5   GRF21   growth-regulating factor 
 gma-u.5   GRF19   growth-regulating factor 
 mtr-u.5   25482044   growth-regulating factor 1 
 ath-u.5   GRF1   growth-regulating factor 1 
 ath-u.5   GRF2   growth-regulating factor 2 
 vvi-u.5   100853530   growth-regulating factor 1 
 vvi-u.5   100260890   growth-regulating factor 1 
 sly-u.5   101252681   growth-regulating factor 1-like 
 sly-u.5   101244049   growth-regulating factor 2-like 
 osa-u.5   9268363   growth-regulating factor 7-like 
 osa-u.5   4333990   growth-regulating factor 6-like 
 zma-u.5   100285734   uncharacterized LOC100285734 
 zma-u.5   100191470   uncharacterized LOC100191470 

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Top 50 coexpressed genes to 7497735 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7497735 (ppo-u.5 coexpression data)

CoexMap"7497735"


ppoLOC7497735 | Entrez gene ID : 7497735    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 1 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (264 genes)  IEA  
GO:0032502 [list] [network] developmental process  (406 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002310328.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002310328.4)
Subcellular
localization
TargetP
other 7  (predict for XP_002310328.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7497735

.
ppo-r.4
for
7497735

.
ppo-m.4
for
7497735

.
ppo-u.5
for
7472639

.
ppo-u.5
for
7464777

.
ppo-u.5
for
7497312

.
gma-u.5
for
GRF18

.
gma-u.5
for
GRF21

.
gma-u.5
for
GRF19

.
mtr-u.5
for
25482044

.
ath-u.5
for
GRF1

.
ath-u.5
for
GRF2

.
vvi-u.5
for
100853530

.
vvi-u.5
for
100260890

.
sly-u.5
for
101252681

.
sly-u.5
for
101244049

.
osa-u.5
for
9268363

.
osa-u.5
for
4333990

.
zma-u.5
for
100285734

.
zma-u.5
for
100191470

.


Ortholog ID: 3199
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol GRF1 GRF2 GRF22 GRF18 LOC101252681 LOC101244049 LOC9268363 LOC4333990 LOC100285734 LOC100191470 LOC103862578 LOC103858126 LOC100260890 LOC100853530 LOC7497735 LOC7464777 LOC25482044 LOC123090965 LOC123087001 LOC123447656 LOC121202961 LOC107938334 LOC125584397 LOC106407512 LOC8060535 LOC102582107 LOC102595967 LOC102618741 LOC100833132 LOC107764760 LOC107808379
Function* growth-regulating factor 1 growth-regulating factor 2 growth-regulating factor growth-regulating factor growth-regulating factor 1-like growth-regulating factor 2-like growth-regulating factor 7-like growth-regulating factor 6-like uncharacterized LOC100285734 uncharacterized LOC100191470 growth-regulating factor 2 growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 6 growth-regulating factor 6 growth-regulating factor 6-like growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1-like growth-regulating factor 2-like growth-regulating factor 6 growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1 growth-regulating factor 6 growth-regulating factor 1 growth-regulating factor 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816815 829930 100807080 100818860 101252681 101244049 9268363 4333990 100285734 100191470 103862578 103858126 100260890 100853530 7497735 7464777 25482044 123090965 123087001 123447656 121202961 107938334 125584397 106407512 8060535 102582107 102595967 102618741 100833132 107764760 107808379
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