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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107910325   growth-regulating factor 6 
 ghi-r.1   107905164   growth-regulating factor 1 
 ghi-r.1   107930622   growth-regulating factor 1 
 ghi-r.1   107938334   growth-regulating factor 1 
 ath-u.5   GRF1   growth-regulating factor 1 
 ath-u.5   GRF2   growth-regulating factor 2 
 bra-r.6   103862578   growth-regulating factor 2 
 bra-r.6   103858395   growth-regulating factor 1 
 bra-r.6   103858126   growth-regulating factor 2 
 bna-r.1   106383561   growth-regulating factor 2-like 
 bna-r.1   106389497   growth-regulating factor 1 
 bna-r.1   106407512   growth-regulating factor 2-like 
 cit-r.1   102618741   growth-regulating factor 1 
 gma-u.5   GRF21   growth-regulating factor 
 gma-u.5   GRF22   growth-regulating factor 
 gma-u.5   GRF19   growth-regulating factor 
 vvi-u.5   100853530   growth-regulating factor 1 
 vvi-u.5   100260890   growth-regulating factor 1 
 ppo-u.5   7497735   growth-regulating factor 1 
 ppo-u.5   7464777   growth-regulating factor 1 
 ppo-u.5   7472639   growth-regulating factor 6-like 
 mtr-u.5   25482044   growth-regulating factor 1 
 sly-u.5   101244049   growth-regulating factor 2-like 
 sly-u.5   101252681   growth-regulating factor 1-like 
 sot-r.1   102582107   growth-regulating factor 1-like 
 sot-r.1   102595967   growth-regulating factor 1-like 
 nta-r.1   107808379   growth-regulating factor 1-like 
 nta-r.1   107760271   growth-regulating factor 1-like 
 nta-r.1   107763641   growth-regulating factor 1-like 
 osa-u.5   4333990   growth-regulating factor 6-like 
 osa-u.5   9268363   growth-regulating factor 7-like 
 zma-u.5   100191470   uncharacterized LOC100191470 
 zma-u.5   100285734   uncharacterized LOC100285734 
 tae-r.2   123090965   growth-regulating factor 6 
 tae-r.2   123087001   growth-regulating factor 6 
 tae-r.2   123095990   growth-regulating factor 6 
 hvu-r.1   123447656   growth-regulating factor 6-like 
 sbi-r.1   8060535   growth-regulating factor 6 
 bdi-r.1   100833132   growth-regulating factor 6 

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Top 50 coexpressed genes to 107910325 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107910325 (ghi-r.1 coexpression data)

CoexMap"107910325"


ghiLOC107910325 | Entrez gene ID : 107910325    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 2 3 1 2 2 3 2 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (617 genes)  IEA  
GO:0032502 [list] [network] developmental process  (1029 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016693628.2 [sequence] [blastp]
XP_016693629.2 [sequence] [blastp]
XP_016693630.2 [sequence] [blastp]
XP_016693631.2 [sequence] [blastp]
XP_016693632.2 [sequence] [blastp]
XP_040944443.1 [sequence] [blastp]
XP_040944444.1 [sequence] [blastp]
XP_040944445.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016693628.2)
nucl 10  (predict for XP_016693629.2)
nucl 9,  cyto_nucl 5  (predict for XP_016693630.2)
nucl 9,  cyto_nucl 5  (predict for XP_016693631.2)
nucl 9,  cyto_nucl 5  (predict for XP_016693632.2)
nucl 9,  cyto_nucl 5  (predict for XP_040944443.1)
nucl 8,  chlo 2  (predict for XP_040944444.1)
nucl 8,  chlo 2  (predict for XP_040944445.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016693628.2)
other 9  (predict for XP_016693629.2)
other 4  (predict for XP_016693630.2)
other 4  (predict for XP_016693631.2)
other 4  (predict for XP_016693632.2)
other 4  (predict for XP_040944443.1)
other 4  (predict for XP_040944444.1)
other 4  (predict for XP_040944445.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107910325
ghi-r.1
for
107905164
ghi-r.1
for
107930622
ghi-r.1
for
107938334
ath-u.5
for
GRF1
ath-u.5
for
GRF2
bra-r.6
for
103862578
bra-r.6
for
103858395
bra-r.6
for
103858126
bna-r.1
for
106383561
bna-r.1
for
106389497
bna-r.1
for
106407512
cit-r.1
for
102618741
gma-u.5
for
GRF21
gma-u.5
for
GRF22
gma-u.5
for
GRF19
vvi-u.5
for
100853530
vvi-u.5
for
100260890
ppo-u.5
for
7497735
ppo-u.5
for
7464777
ppo-u.5
for
7472639
mtr-u.5
for
25482044
sly-u.5
for
101244049
sly-u.5
for
101252681
sot-r.1
for
102582107
sot-r.1
for
102595967
nta-r.1
for
107808379
nta-r.1
for
107760271
nta-r.1
for
107763641
osa-u.5
for
4333990
osa-u.5
for
9268363
zma-u.5
for
100191470
zma-u.5
for
100285734
tae-r.2
for
123090965
tae-r.2
for
123087001
tae-r.2
for
123095990
hvu-r.1
for
123447656
sbi-r.1
for
8060535
bdi-r.1
for
100833132


Ortholog ID: 3199
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107938334 LOC107941922 LOC121202961 GRF1 GRF2 LOC103862578 LOC103858395 LOC103858126 LOC106407512 LOC106426792 LOC125584397 LOC102618741 GRF21 GRF22 GRF18 LOC100853530 LOC100260890 LOC7497735 LOC7464777 LOC7497312 LOC25482044 LOC101244049 LOC101252681 LOC102582107 LOC102595967 LOC107808379 LOC107760271 LOC107764760 LOC4333990 LOC9268363 LOC100191470 LOC100285734 LOC123090965 LOC123087001 LOC123095990 LOC123447656 LOC8060535 LOC100833132
Function* growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 2 growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 2 growth-regulating factor 2-like growth-regulating factor 2-like growth-regulating factor 1-like growth-regulating factor 1 growth-regulating factor growth-regulating factor growth-regulating factor growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 2-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1 growth-regulating factor 6-like growth-regulating factor 7-like uncharacterized LOC100191470 uncharacterized LOC100285734 growth-regulating factor 6 growth-regulating factor 6 growth-regulating factor 6 growth-regulating factor 6-like growth-regulating factor 6 growth-regulating factor 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107938334 107941922 121202961 816815 829930 103862578 103858395 103858126 106407512 106426792 125584397 102618741 100807610 100807080 100818860 100853530 100260890 7497735 7464777 7497312 25482044 101244049 101252681 102582107 102595967 107808379 107760271 107764760 4333990 9268363 100191470 100285734 123090965 123087001 123095990 123447656 8060535 100833132
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