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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AGL6   AGAMOUS-like 6 
 ath-m.9   AGL6   AGAMOUS-like 6 
 ath-m.4.bio   AGL6   AGAMOUS-like 6 
 ath-m.4.hor   AGL6   AGAMOUS-like 6 
 ath-m.4.lig   AGL6   AGAMOUS-like 6 
 ath-m.4.tis   AGL6   AGAMOUS-like 6 
 ghi-r.1   107962142   MADS-box transcription factor 6 
 ghi-r.1   107900914   agamous-like MADS-box protein MADS3 
 ghi-r.1   121221192   MADS-box transcription factor 6 
 cit-r.1   102613709   agamous-like MADS-box protein MADS3 
 cit-r.1   127901454   agamous-like MADS-box protein MADS3 
 gma-u.5   100820061   agamous-like MADS-box protein MADS3 
 gma-u.5   100810549   agamous-like MADS-box protein MADS3 
 vvi-u.5   100256085   agamous-like MADS-box protein MADS3 
 vvi-u.5   MADS3   MADS-box protein 3 
 sly-u.5   AGL6   AGAMOUS-like MADS-box protein AGL6 
 sot-r.1   102602212   MADS-box transcription factor 6 
 nta-r.1   107821033   protein AGAMOUS-LIKE 6-like 
 nta-r.1   107818774   protein AGAMOUS-LIKE 6 
 osa-u.5   4330328   MADS-box transcription factor 6-like 
 zma-u.5   542256   bearded-ear 1 
 zma-u.5   542709   MADS box protein 
 tae-r.2   123128010   MADS-box transcription factor 6 
 tae-r.2   123145106   MADS-box transcription factor 6 
 tae-r.2   542777   MADS-box transcription factor 6 
 sbi-r.1   8057680   MADS-box transcription factor 17 
 sbi-r.1   8076029   MADS-box transcription factor 6 
 bdi-r.1   AGL6   MADS-box transcription factor 6 

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Top 50 coexpressed genes to AGL6 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AGL6 (ath-m.4.str coexpression data)

CoexMap""


athAGL6 | Entrez gene ID : 819173      
Species ath ghi cit gma vvi sly sot nta osa zma tae sbi bdi hvu mtr bra cre bna ppo
Paralog 6 3 2 2 2 1 1 2 1 2 3 2 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function AGAMOUS-like 6
KEGG
GO BP
GO:0009911 [list] [network] positive regulation of flower development  (44 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO:0048437 [list] [network] floral organ development  (274 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_182089.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_182089.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_182089.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AGL6


ath-m.9
for
AGL6


ath-m.4.bio
for
AGL6


ath-m.4.hor
for
AGL6


ath-m.4.lig
for
AGL6


ath-m.4.tis
for
AGL6


ghi-r.1
for
107962142


ghi-r.1
for
107900914


ghi-r.1
for
121221192


cit-r.1
for
102613709


cit-r.1
for
127901454


gma-u.5
for
100820061


gma-u.5
for
100810549


vvi-u.5
for
100256085


vvi-u.5
for
MADS3


sly-u.5
for
AGL6


sot-r.1
for
102602212


nta-r.1
for
107821033


nta-r.1
for
107818774


osa-u.5
for
4330328


zma-u.5
for
542256


zma-u.5
for
542709


tae-r.2
for
123128010


tae-r.2
for
123145106


tae-r.2
for
542777


sbi-r.1
for
8057680


sbi-r.1
for
8076029


bdi-r.1
for
AGL6

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Ortholog ID: 4707
Species ghi ghi ghi cit cit gma gma vvi vvi sly sot nta nta osa zma zma tae tae tae sbi sbi bdi
Symbol LOC107962142 LOC121221192 LOC107957285 LOC102613709 LOC127901454 LOC100820061 LOC100810549 LOC100256085 MADS3 AGL6 LOC102602212 LOC107821033 LOC107818774 LOC4330328 LOC542256 LOC542709 LOC123128010 LOC123145106 LOC542777 LOC8057680 LOC8076029 AGL6
Function* MADS-box transcription factor 6 MADS-box transcription factor 6 agamous-like MADS-box protein AGL6 agamous-like MADS-box protein MADS3 agamous-like MADS-box protein MADS3 agamous-like MADS-box protein MADS3 agamous-like MADS-box protein MADS3 agamous-like MADS-box protein MADS3 MADS-box protein 3 AGAMOUS-like MADS-box protein AGL6 MADS-box transcription factor 6 protein AGAMOUS-LIKE 6-like protein AGAMOUS-LIKE 6 MADS-box transcription factor 6-like bearded-ear 1 MADS box protein MADS-box transcription factor 6 MADS-box transcription factor 6 MADS-box transcription factor 6 MADS-box transcription factor 17 MADS-box transcription factor 6 MADS-box transcription factor 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00410 beta-Alanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962142 121221192 107957285 102613709 127901454 100820061 100810549 100256085 100232868 101268317 102602212 107821033 107818774 4330328 542256 542709 123128010 123145106 542777 8057680 8076029 100822235
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