ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AGL6	AGAMOUS-like 6
ath-m.4.bio	AGL6	AGAMOUS-like 6
ath-m.4.hor	AGL6	AGAMOUS-like 6
ath-m.4.lig	AGL6	AGAMOUS-like 6
ath-m.4.str	AGL6	AGAMOUS-like 6
ath-m.4.tis	AGL6	AGAMOUS-like 6
ghi-r.1	107962142	MADS-box transcription factor 6
ghi-r.1	107900914	agamous-like MADS-box protein MADS3
ghi-r.1	121221192	MADS-box transcription factor 6
cit-r.1	102613709	agamous-like MADS-box protein MADS3
cit-r.1	127901454	agamous-like MADS-box protein MADS3
gma-u.5	100820061	agamous-like MADS-box protein MADS3
gma-u.5	100810549	agamous-like MADS-box protein MADS3
vvi-u.5	100256085	agamous-like MADS-box protein MADS3
vvi-u.5	MADS3	MADS-box protein 3
sly-u.5	AGL6	AGAMOUS-like MADS-box protein AGL6
sot-r.1	102602212	MADS-box transcription factor 6
nta-r.1	107821033	protein AGAMOUS-LIKE 6-like
nta-r.1	107818774	protein AGAMOUS-LIKE 6
osa-u.5	4330328	MADS-box transcription factor 6-like
zma-u.5	542256	bearded-ear 1
zma-u.5	542709	MADS box protein
tae-r.2	123128010	MADS-box transcription factor 6
tae-r.2	123145106	MADS-box transcription factor 6
tae-r.2	542777	MADS-box transcription factor 6
sbi-r.1	8057680	MADS-box transcription factor 17
sbi-r.1	8076029	MADS-box transcription factor 6
bdi-r.1	AGL6	MADS-box transcription factor 6

Annotation

functional annotation

KEGG

GO BP

GO:0009911 [list] [network] positive regulation of flower development	(44 genes)	IMP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem	(186 genes)	IMP
GO:0048437 [list] [network] floral organ development	(274 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_182089.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for NP_182089.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for NP_182089.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AGL6	ath-m.4.bio for AGL6	ath-m.4.hor for AGL6	ath-m.4.lig for AGL6	ath-m.4.str for AGL6	ath-m.4.tis for AGL6	ghi-r.1 for 107962142	ghi-r.1 for 107900914	ghi-r.1 for 121221192	cit-r.1 for 102613709	cit-r.1 for 127901454	gma-u.5 for 100820061	gma-u.5 for 100810549	vvi-u.5 for 100256085	vvi-u.5 for MADS3	sly-u.5 for AGL6	sot-r.1 for 102602212	nta-r.1 for 107821033	nta-r.1 for 107818774	osa-u.5 for 4330328	zma-u.5 for 542256	zma-u.5 for 542709	tae-r.2 for 123128010	tae-r.2 for 123145106	tae-r.2 for 542777	sbi-r.1 for 8057680	sbi-r.1 for 8076029	bdi-r.1 for AGL6