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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT1G31220   Formyl transferase 
 ath-u.5   AT1G31220   Formyl transferase 
 ath-r.7   AT1G31220   Formyl transferase 
 ath-m.9   AT1G31220   Formyl transferase 
 ath-e.2   AT1G31220   Formyl transferase 
 ath-m.4.bio   AT1G31220   Formyl transferase 
 ath-m.4.hor   AT1G31220   Formyl transferase 
 ath-m.4.lig   AT1G31220   Formyl transferase 
 ath-m.4.tis   AT1G31220   Formyl transferase 
 gma-u.5   PUR3   glycinamide ribonucleotide transformylase 
 gma-u.5   100784486   phosphoribosylglycinamide formyltransferase, chloroplastic 
 vvi-u.5   100245619   phosphoribosylglycinamide formyltransferase, chloroplastic 
 ppo-u.5   18103829   phosphoribosylglycinamide formyltransferase, chloroplastic 
 mtr-u.5   11431305   phosphoribosylglycinamide formyltransferase, chloroplastic 
 sly-u.5   101252648   phosphoribosylglycinamide formyltransferase, chloroplastic 
 osa-u.5   4345953   phosphoribosylglycinamide formyltransferase, chloroplastic 
 osa-u.5   112939360   phosphoribosylglycinamide formyltransferase, chloroplastic 
 zma-u.5   100272448   Phosphoribosylglycinamide formyltransferase chloroplastic 

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Top 50 coexpressed genes to AT1G31220 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G31220 (ath-m.4.str coexpression data)

CoexMap"840010"


athAT1G31220 | Entrez gene ID : 840010      
Species ath gma vvi ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 9 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00230 [list] [network] Purine metabolism (95 genes)
ath00670 [list] [network] One carbon pool by folate (42 genes)
GO BP
GO:0009152 [list] [network] purine ribonucleotide biosynthetic process  (21 genes)  IGI  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0004644 [list] [network] phosphoribosylglycinamide formyltransferase activity  (1 genes)  IGI  
Protein NP_174407.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  pero 1,  E.R._vacu 1  (predict for NP_174407.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_174407.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT1G31220
ath-u.5
for
AT1G31220
ath-r.7
for
AT1G31220
ath-m.9
for
AT1G31220
ath-e.2
for
AT1G31220
ath-m.4.bio
for
AT1G31220
ath-m.4.hor
for
AT1G31220
ath-m.4.lig
for
AT1G31220
ath-m.4.tis
for
AT1G31220
gma-u.5
for
PUR3
gma-u.5
for
100784486
vvi-u.5
for
100245619
ppo-u.5
for
18103829
mtr-u.5
for
11431305
sly-u.5
for
101252648
osa-u.5
for
4345953
osa-u.5
for
112939360
zma-u.5
for
100272448


Ortholog ID: 8269
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae hvu sbi bdi bdi cre
Symbol AT1G31220 LOC103840262 LOC106349175 LOC106366708 LOC107961941 LOC107910072 LOC102631099 LOC100784486 PUR3 LOC100245619 LOC18103829 LOC11431305 LOC101252648 LOC102577623 LOC107803256 LOC142166170 LOC112939360 LOC4345953 LOC100272448 LOC123069501 LOC123151680 LOC123410286 LOC8080300 LOC100832826 LOC100841354 CHLRE_12g550700v5
Function* Formyl transferase phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic glycinamide ribonucleotide transformylase phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic glycinamide ribonucleotide transformylase phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic-like phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic Phosphoribosylglycinamide formyltransferase chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 7
gma01230 Biosynthesis of amino acids 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00230 Purine metabolism 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00670 One carbon pool by folate 6
tae04141 Protein processing in endoplasmic reticulum 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
tae03015 mRNA surveillance pathway 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00230 Purine metabolism 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01232 Nucleotide metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 4
cre00270 Cysteine and methionine metabolism 2
cre01230 Biosynthesis of amino acids 2
cre01240 Biosynthesis of cofactors 2
cre00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840010 103840262 106349175 106366708 107961941 107910072 102631099 100784486 548052 100245619 18103829 11431305 101252648 102577623 107803256 142166170 112939360 4345953 100272448 123069501 123151680 123410286 8080300 100832826 100841354 5719656
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