Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   GRAS6   GRAS6 protein 
 sly-r.6   GRAS6   GRAS6 protein 
 ath-u.5   SCL1   SCARECROW-like 1 
 gma-u.5   100807048   scarecrow-like protein 1 
 gma-u.5   100798897   scarecrow-like protein 1 
 gma-u.5   100796434   scarecrow-like protein 1 
 vvi-u.5   100253954   scarecrow-like protein 1 
 vvi-u.5   100854518   scarecrow-like protein 1 
 ppo-u.5   18099612   scarecrow-like protein 1 
 ppo-u.5   7466426   scarecrow-like protein 1 
 mtr-u.5   25482425   scarecrow-like protein 1 
 mtr-u.5   25489758   scarecrow-like protein 1 
 osa-u.5   4324850   scarecrow-like protein 1 
 zma-u.5   103630377   scarecrow-like protein 1 

close


Top 50 coexpressed genes to GRAS6 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to GRAS6 (sly-u.5 coexpression data)

CoexMap"100037499"


slyGRAS6 | Entrez gene ID : 100037499      
Species sly ath gma vvi ppo mtr osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 2 1 3 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (778 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1125 genes)  IEA  
Protein NP_001234315.2 [sequence] [blastp]
NP_001293092.1 [sequence] [blastp]
NP_001293093.1 [sequence] [blastp]
NP_001293094.1 [sequence] [blastp]
NP_001293095.1 [sequence] [blastp]
NP_001293096.1 [sequence] [blastp]
XP_010319995.2 [sequence] [blastp]
XP_010319997.2 [sequence] [blastp]
XP_019068748.2 [sequence] [blastp]
XP_019068749.2 [sequence] [blastp]
XP_019068750.2 [sequence] [blastp]
XP_069152420.1 [sequence] [blastp]
XP_069152421.1 [sequence] [blastp]
XP_069152422.1 [sequence] [blastp]
XP_069152423.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_001234315.2)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_001293092.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_001293093.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_001293094.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_001293095.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_001293096.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_010319995.2)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_010319997.2)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_019068748.2)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_019068749.2)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_019068750.2)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_069152420.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_069152421.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_069152422.1)
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_069152423.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001234315.2)
mito 8  (predict for NP_001293092.1)
mito 8  (predict for NP_001293093.1)
mito 8  (predict for NP_001293094.1)
mito 8  (predict for NP_001293095.1)
mito 8  (predict for NP_001293096.1)
mito 8  (predict for XP_010319995.2)
mito 8  (predict for XP_010319997.2)
mito 8  (predict for XP_019068748.2)
mito 8  (predict for XP_019068749.2)
mito 8  (predict for XP_019068750.2)
mito 8  (predict for XP_069152420.1)
mito 8  (predict for XP_069152421.1)
mito 8  (predict for XP_069152422.1)
mito 8  (predict for XP_069152423.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
GRAS6

.
sly-r.6
for
GRAS6

.
ath-u.5
for
SCL1

.
gma-u.5
for
100807048

.
gma-u.5
for
100798897

.
gma-u.5
for
100796434

.
vvi-u.5
for
100253954

.
vvi-u.5
for
100854518

.
ppo-u.5
for
18099612

.
ppo-u.5
for
7466426

.
mtr-u.5
for
25482425

.
mtr-u.5
for
25489758

.
osa-u.5
for
4324850

.
zma-u.5
for
103630377

.


Ortholog ID: 6135
Species ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol SCL1 LOC100796434 LOC100788103 GRAS6 LOC4324850 LOC103630377 LOC103829376 LOC103872980 LOC100253954 LOC100854518 LOC18099612 LOC7466426 LOC25489758 LOC25482425 LOC123071826 LOC123062954 LOC123445132 LOC107910415 LOC107897112 LOC106376448 LOC106348605 LOC110433963 LOC8076981 LOC102601859 LOC102611655 LOC100821689 LOC107819615 LOC107796430
Function* SCARECROW-like 1 scarecrow-like protein 1 scarecrow-like protein 1 GRAS6 protein scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00030 Pentose phosphate pathway 2
mtr00051 Fructose and mannose metabolism 2
mtr00052 Galactose metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838743 100796434 100788103 100037499 4324850 103630377 103829376 103872980 100253954 100854518 18099612 7466426 25489758 25482425 123071826 123062954 123445132 107910415 107897112 106376448 106348605 110433963 8076981 102601859 102611655 100821689 107819615 107796430
The preparation time of this page was 0.2 [sec].