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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100253954   scarecrow-like protein 1 
 vvi-r.5   100253954   scarecrow-like protein 1 
 vvi-m.5   100253954   scarecrow-like protein 1 
 vvi-u.5   100854518   scarecrow-like protein 1 
 ath-u.5   SCL1   SCARECROW-like 1 
 gma-u.5   100788103   scarecrow-like protein 1 
 gma-u.5   100798897   scarecrow-like protein 1 
 gma-u.5   100807048   scarecrow-like protein 1 
 ppo-u.5   18099612   scarecrow-like protein 1 
 ppo-u.5   7466426   scarecrow-like protein 1 
 mtr-u.5   25489758   scarecrow-like protein 1 
 mtr-u.5   25482425   scarecrow-like protein 1 
 sly-u.5   GRAS6   GRAS6 protein 
 osa-u.5   4324850   scarecrow-like protein 1 
 zma-u.5   103630377   scarecrow-like protein 1 

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Top 50 coexpressed genes to 100253954 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100253954 (vvi-u.5 coexpression data)

CoexMap"100253954"


vviLOC100253954 | Entrez gene ID : 100253954      
Species vvi ath gma ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 1 3 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (598 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
Protein XP_002266415.1 [sequence] [blastp]
XP_010664869.1 [sequence] [blastp]
XP_010664870.1 [sequence] [blastp]
XP_059590440.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for XP_002266415.1)
chlo 7,  nucl 2  (predict for XP_010664869.1)
chlo 7,  nucl 2  (predict for XP_010664870.1)
chlo 7,  nucl 2  (predict for XP_059590440.1)
Subcellular
localization
TargetP
other 3  (predict for XP_002266415.1)
other 3  (predict for XP_010664869.1)
other 3  (predict for XP_010664870.1)
other 3  (predict for XP_059590440.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100253954
vvi-r.5
for
100253954
vvi-m.5
for
100253954
vvi-u.5
for
100854518
ath-u.5
for
SCL1
gma-u.5
for
100788103
gma-u.5
for
100798897
gma-u.5
for
100807048
ppo-u.5
for
18099612
ppo-u.5
for
7466426
mtr-u.5
for
25489758
mtr-u.5
for
25482425
sly-u.5
for
GRAS6
osa-u.5
for
4324850
zma-u.5
for
103630377


Ortholog ID: 6135
Species vvi vvi ath gma gma bra bra ppo ppo mtr mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi sbi bdi
Symbol LOC100253954 LOC100854518 SCL1 LOC100796434 LOC100788103 LOC103829376 LOC103872980 LOC18099612 LOC7466426 LOC25489758 LOC25482425 LOC107910415 LOC107897112 LOC106376448 LOC106348605 LOC102611655 GRAS6 LOC102601859 LOC107819615 LOC107796430 LOC4324850 LOC103630377 LOC123071826 LOC123062954 LOC123445132 LOC110433963 LOC8076981 LOC100821689
Function* scarecrow-like protein 1 scarecrow-like protein 1 SCARECROW-like 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 GRAS6 protein scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1 scarecrow-like protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00030 Pentose phosphate pathway 2
mtr00051 Fructose and mannose metabolism 2
mtr00052 Galactose metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100253954 100854518 838743 100796434 100788103 103829376 103872980 18099612 7466426 25489758 25482425 107910415 107897112 106376448 106348605 102611655 100037499 102601859 107819615 107796430 4324850 103630377 123071826 123062954 123445132 110433963 8076981 100821689
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