ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	100127073	uncharacterized LOC100127073
osa-u.5	4329698	bHLH transcription factor RHL1
osa-u.5	4340382	transcription factor LRL3
zma-u.5	732777	bHLH transcription factor PTF1
zma-u.5	100192577	uncharacterized LOC100192577
zma-u.5	103627314	putative HLH DNA-binding domain superfamily protein
vvi-u.5	100257707	uncharacterized LOC100257707
ppo-u.5	18100273	uncharacterized LOC18100273

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(1094 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(8281 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(462 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(643 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(2051 genes)	IEA

Protein

XP_044438682.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1, golg 1

(predict for XP_044438682.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044438682.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 100127073	osa-u.5 for 4329698	osa-u.5 for 4340382	zma-u.5 for 732777	zma-u.5 for 100192577	zma-u.5 for 103627314	vvi-u.5 for 100257707	ppo-u.5 for 18100273

Ortholog ID: 12325

Species

tae

hvu

bdi

osa

zma

sbi

vvi

ppo

ghi

cit

Symbol

Function^*

transcription factor bHLH7

transcription factor UNE12

transcription factor bHLH110-like

uncharacterized LOC100841109

uncharacterized LOC100834217

transcription factor LRL3

bHLH transcription factor RHL1

putative HLH DNA-binding domain superfamily protein

uncharacterized LOC100192577

uncharacterized LOC110434329

transcription factor bHLH66

uncharacterized LOC100257707

uncharacterized LOC18100273

uncharacterized LOC107907072

transcription factor LRL1

hypothetical protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	7
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	5
ghi00730	Thiamine metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

123156746

123149136

123408356

100841109

100834217

4340382

4329698

103627314

100192577

110434329

8065450

100257707

18100273

107907072

107929883

102611966

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100127073 (tae-r.2 coexpression data)

Top 50 enrichment test to 100127073 (tae-r.2 coexpression data)


Species	tae	osa	zma	vvi	ppo	bdi	mtr	bra	hvu	cit	gma	bna	ath	sbi	sly	ghi	sot	nta	cre
Paralog	1	2	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100127073 (tae-r.2 coexpression data)

Top 50 enrichment test to 100127073 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**