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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907072   uncharacterized LOC107907072 
 vvi-u.5   100257707   uncharacterized LOC100257707 
 ppo-u.5   18100273   uncharacterized LOC18100273 
 osa-u.5   4329698   bHLH transcription factor RHL1 
 osa-u.5   4340382   transcription factor LRL3 
 zma-u.5   732777   bHLH transcription factor PTF1 
 zma-u.5   100192577   uncharacterized LOC100192577 
 zma-u.5   103627314   putative HLH DNA-binding domain superfamily protein 

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Top 50 coexpressed genes to 107907072 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107907072 (ghi-r.1 coexpression data)

CoexMap"107907072"


ghiLOC107907072 | Entrez gene ID : 107907072    
Species ghi vvi ppo osa zma bdi mtr bra hvu cit gma bna ath sbi sly sot nta cre tae
Paralog 1 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016689769.1 [sequence] [blastp]
XP_016689770.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_016689769.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_016689770.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016689769.1)
other 8  (predict for XP_016689770.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907072
vvi-u.5
for
100257707
ppo-u.5
for
18100273
osa-u.5
for
4329698
osa-u.5
for
4340382
zma-u.5
for
732777
zma-u.5
for
100192577
zma-u.5
for
103627314


Ortholog ID: 12325
Species ghi ghi cit vvi ppo osa osa zma zma tae tae hvu sbi sbi bdi bdi
Symbol LOC107907072 LOC107929883 LOC102611966 LOC100257707 LOC18100273 LOC4340382 LOC4329698 LOC103627314 LOC100192577 LOC123156746 LOC123149136 LOC123408356 LOC110434329 LOC8065450 LOC100841109 LOC100834217
Function* uncharacterized LOC107907072 transcription factor LRL1 hypothetical protein uncharacterized LOC100257707 uncharacterized LOC18100273 transcription factor LRL3 bHLH transcription factor RHL1 putative HLH DNA-binding domain superfamily protein uncharacterized LOC100192577 transcription factor bHLH7 transcription factor UNE12 transcription factor bHLH110-like uncharacterized LOC110434329 transcription factor bHLH66 uncharacterized LOC100841109 uncharacterized LOC100834217
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 5
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 7
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
tae04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107907072 107929883 102611966 100257707 18100273 4340382 4329698 103627314 100192577 123156746 123149136 123408356 110434329 8065450 100841109 100834217
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