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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100191688   putative RING zinc finger domain superfamily protein 
 zma-r.6   100191688   putative RING zinc finger domain superfamily protein 
 zma-u.5   100303800   RING-H2 finger protein ATL3J 
 sbi-r.1   8078383   E3 ubiquitin-protein ligase ATL4 
 osa-u.5   4336800   E3 ubiquitin-protein ligase ATL4 
 osa-u.5   4330365   E3 ubiquitin-protein ligase ATL4 
 hvu-r.1   123402687   E3 ubiquitin-protein ligase ATL4-like 
 hvu-r.1   123430823   E3 ubiquitin-protein ligase ATL4-like 
 ath-u.5   ATL4   TOXICOS EN LEVADURA 4 
 gma-u.5   100776516   E3 ubiquitin-protein ligase ATL4 
 gma-u.5   100817751   E3 ubiquitin-protein ligase ATL4 
 sly-u.5   101245506   E3 ubiquitin-protein ligase ATL4 
 bra-r.6   103830246   E3 ubiquitin-protein ligase ATL4-like 
 vvi-u.5   100258250   E3 ubiquitin-protein ligase ATL4 
 mtr-u.5   11443292   E3 ubiquitin-protein ligase ATL4 
 ghi-r.1   107945587   E3 ubiquitin-protein ligase ATL4 
 ghi-r.1   121210877   E3 ubiquitin-protein ligase ATL4 
 ghi-r.1   107950778   E3 ubiquitin-protein ligase ATL4 
 bna-r.1   106404531   E3 ubiquitin-protein ligase ATL4-like 
 sot-r.1   102587185   E3 ubiquitin-protein ligase ATL4 
 cit-r.1   102616322   E3 ubiquitin-protein ligase ATL4 
 nta-r.1   107797592   E3 ubiquitin-protein ligase ATL4-like 

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Top 50 coexpressed genes to 100191688 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100191688 (zma-u.5 coexpression data)

CoexMap"100191688"


zmaLOC100191688 | Entrez gene ID : 100191688      
Species zma sbi osa hvu ath gma sly bra vvi mtr ghi bna sot cit nta cre ppo tae bdi
Paralog 3 1 2 2 1 2 1 1 1 1 3 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (391 genes)  IEA  
GO CC
GO MF
Protein NP_001130589.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_001130589.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_001130589.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100191688
zma-r.6
for
100191688
zma-u.5
for
100303800
sbi-r.1
for
8078383
osa-u.5
for
4336800
osa-u.5
for
4330365
hvu-r.1
for
123402687
hvu-r.1
for
123430823
ath-u.5
for
ATL4
gma-u.5
for
100776516
gma-u.5
for
100817751
sly-u.5
for
101245506
bra-r.6
for
103830246
vvi-u.5
for
100258250
mtr-u.5
for
11443292
ghi-r.1
for
107945587
ghi-r.1
for
121210877
ghi-r.1
for
107950778
bna-r.1
for
106404531
sot-r.1
for
102587185
cit-r.1
for
102616322
nta-r.1
for
107797592


Ortholog ID: 3472
Species zma zma sbi osa osa tae hvu hvu ath gma gma sly bra vvi mtr ghi ghi bna sot cit nta
Symbol LOC100191688 LOC100303800 LOC8078383 LOC4336800 LOC4330365 LOC123141660 LOC123402687 LOC123430823 ATL4 LOC100776516 LOC100817751 LOC101245506 LOC103830246 LOC100258250 LOC11443292 LOC107945587 LOC107908469 LOC106404531 LOC102587185 LOC102616322 LOC107797592
Function* putative RING zinc finger domain superfamily protein RING-H2 finger protein ATL3J E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4-like TOXICOS EN LEVADURA 4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 6
ath04626 Plant-pathogen interaction 6
ath02010 ABC transporters 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 6
ghi04626 Plant-pathogen interaction 6
ghi04145 Phagosome 4
ghi04517 IgSF CAM signaling 4
ghi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100191688 100303800 8078383 4336800 4330365 123141660 123402687 123430823 825192 100776516 100817751 101245506 103830246 100258250 11443292 107945587 107908469 106404531 102587185 102616322 107797592
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