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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107797592  E3 ubiquitin-protein ligase ATL4-like 
 sly-u.5  101245506  E3 ubiquitin-protein ligase ATL4 
 ath-u.5  ATL4  TOXICOS EN LEVADURA 4 
 gma-u.5  100776516  E3 ubiquitin-protein ligase ATL4 
 gma-u.5  100817751  E3 ubiquitin-protein ligase ATL4 
 vvi-u.5  100258250  E3 ubiquitin-protein ligase ATL4 
 mtr-u.5  11443292  E3 ubiquitin-protein ligase ATL4 
 osa-u.5  4330365  E3 ubiquitin-protein ligase ATL4 
 osa-u.5  4336800  E3 ubiquitin-protein ligase ATL4 
 zma-u.5  100303800  RING-H2 finger protein ATL3J 
 zma-u.5  100191688  putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to 107797592 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107797592 (nta-r.1 coexpression data)

CoexMap"107797592"


ntaLOC107797592 | Entrez gene ID : 107797592
Species nta sly ath gma vvi mtr osa zma bdi hvu bra cit bna ppo sbi ghi sot cre tae
Paralog 1 1 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (573 genes)  IEA  
GO CC
GO MF
Protein XP_075112878.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 2,  vacu 1,  chlo_mito 1,  nucl 1,  mito 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_075112878.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_075112878.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107797592


sly-u.5
for
101245506


ath-u.5
for
ATL4


gma-u.5
for
100776516


gma-u.5
for
100817751


vvi-u.5
for
100258250


mtr-u.5
for
11443292


osa-u.5
for
4330365


osa-u.5
for
4336800


zma-u.5
for
100303800


zma-u.5
for
100191688



Ortholog ID: 3472
Species sly sot ath gma gma bra vvi mtr ghi cit osa osa zma tae hvu hvu sbi
Symbol LOC101245506 LOC102587185 ATL4 LOC100776516 LOC100817751 LOC103830246 LOC100258250 LOC11443292 LOC107945587 LOC102616322 LOC4330365 LOC4336800 LOC100303800 LOC123141660 LOC123430823 LOC123402687 LOC8078383
Function* E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 TOXICOS EN LEVADURA 4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 RING-H2 finger protein ATL3J E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 6
ath04626 Plant-pathogen interaction 6
ath02010 ABC transporters 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245506 102587185 825192 100776516 100817751 103830246 100258250 11443292 107945587 102616322 4330365 4336800 100303800 123141660 123430823 123402687 8078383
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