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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11443292   E3 ubiquitin-protein ligase ATL4 
 mtr-r.5   11443292   E3 ubiquitin-protein ligase ATL4 
 mtr-m.5   11443292   E3 ubiquitin-protein ligase ATL4 
 gma-u.5   100776516   E3 ubiquitin-protein ligase ATL4 
 gma-u.5   100817751   E3 ubiquitin-protein ligase ATL4 
 ath-u.5   ATL4   TOXICOS EN LEVADURA 4 
 vvi-u.5   100258250   E3 ubiquitin-protein ligase ATL4 
 sly-u.5   101245506   E3 ubiquitin-protein ligase ATL4 
 osa-u.5   4336800   E3 ubiquitin-protein ligase ATL4 
 osa-u.5   4330365   E3 ubiquitin-protein ligase ATL4 
 zma-u.5   100303800   RING-H2 finger protein ATL3J 
 zma-u.5   100191688   putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to 11443292 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11443292 (mtr-u.5 coexpression data)

CoexMap"11443292"


mtrLOC11443292 | Entrez gene ID : 11443292      
Species mtr gma ath vvi sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 3 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (329 genes)  IEA  
GO CC
GO MF
Protein XP_003595366.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003595366.1)
Subcellular
localization
TargetP
scret 1  (predict for XP_003595366.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11443292
mtr-r.5
for
11443292
mtr-m.5
for
11443292
gma-u.5
for
100776516
gma-u.5
for
100817751
ath-u.5
for
ATL4
vvi-u.5
for
100258250
sly-u.5
for
101245506
osa-u.5
for
4336800
osa-u.5
for
4330365
zma-u.5
for
100303800
zma-u.5
for
100191688


Ortholog ID: 3472
Species mtr gma gma ath bra vvi ghi cit sly sot osa osa zma tae hvu hvu sbi
Symbol LOC11443292 LOC100776516 LOC100817751 ATL4 LOC103830246 LOC100258250 LOC107945587 LOC102616322 LOC101245506 LOC102587185 LOC4330365 LOC4336800 LOC100303800 LOC123141660 LOC123430823 LOC123402687 LOC8078383
Function* E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 TOXICOS EN LEVADURA 4 E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4 RING-H2 finger protein ATL3J E3 ubiquitin-protein ligase ATL4 E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4-like E3 ubiquitin-protein ligase ATL4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 6
ath04626 Plant-pathogen interaction 6
ath02010 ABC transporters 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11443292 100776516 100817751 825192 103830246 100258250 107945587 102616322 101245506 102587185 4330365 4336800 100303800 123141660 123430823 123402687 8078383
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