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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   100192176   DNA repair protein RAD51 homolog 4 
 osa-u.5   4346376   DNA repair protein RAD51 homolog 4 
 zma-u.5   100282783   uncharacterized LOC100282783 
 ath-u.5   RAD51D   DNA repair RAD51-like protein 
 gma-u.5   100780427   DNA repair protein RAD51 homolog 4-like 
 sly-u.5   101264490   DNA repair protein RAD51 homolog 4 
 vvi-u.5   100257115   DNA repair protein RAD51 homolog 4 
 mtr-u.5   25492474   DNA repair protein RAD51 homolog 4 

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Top 50 coexpressed genes to 100192176 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100192176 (tae-r.2 coexpression data)

CoexMap"100192176"


taeLOC100192176 | Entrez gene ID : 100192176    
Species tae osa zma ath gma sly vvi mtr hvu ghi bdi cit bra cre sbi ppo bna nta sot
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03440 [list] [network] Homologous recombination (198 genes)
GO BP
GO:0042148 [list] [network] DNA strand invasion  (12 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (102 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (129 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (222 genes)  IEA  
GO CC
GO:0033063 [list] [network] Rad51B-Rad51C-Rad51D-XRCC2 complex  (13 genes)  IEA  
GO:0005815 [list] [network] microtubule organizing center  (50 genes)  IEA  
GO:0005657 [list] [network] replication fork  (142 genes)  IEA  
GO MF
GO:0000400 [list] [network] four-way junction DNA binding  (16 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (73 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (212 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044438888.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  plas 3,  golg 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_044438888.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044438888.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
100192176

.
osa-u.5
for
4346376

.
zma-u.5
for
100282783

.
ath-u.5
for
RAD51D

.
gma-u.5
for
100780427

.
sly-u.5
for
101264490

.
vvi-u.5
for
100257115

.
mtr-u.5
for
25492474

.


Ortholog ID: 11460
Species ath gma sly osa zma vvi mtr tae ghi ghi cre bdi nta nta
Symbol RAD51D LOC100780427 LOC101264490 LOC4346376 LOC100282783 LOC100257115 LOC25492474 LOC100192176 LOC107959080 LOC107906167 CHLRE_03g184651v5 LOC100827134 LOC107806596 LOC107785938
Function* DNA repair RAD51-like protein DNA repair protein RAD51 homolog 4-like DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 uncharacterized LOC100282783 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 uncharacterized protein DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837289 100780427 101264490 4346376 100282783 100257115 25492474 100192176 107959080 107906167 5717423 100827134 107806596 107785938
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