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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100827134   DNA repair protein RAD51 homolog 4 
 osa-u.5   4346376   DNA repair protein RAD51 homolog 4 
 zma-u.5   100282783   uncharacterized LOC100282783 
 ath-u.5   RAD51D   DNA repair RAD51-like protein 
 gma-u.5   100780427   DNA repair protein RAD51 homolog 4-like 
 sly-u.5   101264490   DNA repair protein RAD51 homolog 4 
 vvi-u.5   100257115   DNA repair protein RAD51 homolog 4 
 mtr-u.5   25492474   DNA repair protein RAD51 homolog 4 

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Top 50 coexpressed genes to 100827134 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100827134 (bdi-r.1 coexpression data)

CoexMap"100827134"


bdiLOC100827134 | Entrez gene ID : 100827134      
Species bdi osa zma ath gma sly vvi mtr hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03440 [list] [network] Homologous recombination (63 genes)
GO BP
GO:0042148 [list] [network] DNA strand invasion  (5 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (39 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (51 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (76 genes)  IEA  
GO CC
GO:0033063 [list] [network] Rad51B-Rad51C-Rad51D-XRCC2 complex  (4 genes)  IEA  
GO:0005813 [list] [network] centrosome  (29 genes)  IEA  
GO:0005657 [list] [network] replication fork  (48 genes)  IEA  
GO MF
GO:0000400 [list] [network] four-way junction DNA binding  (5 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (25 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (65 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
Protein XP_003563123.1 [sequence] [blastp]
XP_010238412.1 [sequence] [blastp]
XP_010238415.1 [sequence] [blastp]
XP_014754280.1 [sequence] [blastp]
XP_014754285.1 [sequence] [blastp]
XP_014754288.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 2,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_003563123.1)
chlo 3,  cyto 2,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_010238412.1)
chlo 6,  E.R. 3  (predict for XP_010238415.1)
chlo 3,  cyto 2,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_014754280.1)
chlo 3,  cyto 2,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_014754285.1)
chlo 3,  cyto 2,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_014754288.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003563123.1)
other 9  (predict for XP_010238412.1)
mito 8  (predict for XP_010238415.1)
other 9  (predict for XP_014754280.1)
other 9  (predict for XP_014754285.1)
other 9  (predict for XP_014754288.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100827134
osa-u.5
for
4346376
zma-u.5
for
100282783
ath-u.5
for
RAD51D
gma-u.5
for
100780427
sly-u.5
for
101264490
vvi-u.5
for
100257115
mtr-u.5
for
25492474


Ortholog ID: 11460
Species bdi tae osa zma ath gma sly vvi mtr ghi ghi nta nta cre
Symbol LOC100827134 LOC100192176 LOC4346376 LOC100282783 RAD51D LOC100780427 LOC101264490 LOC100257115 LOC25492474 LOC107959080 LOC107906167 LOC107806596 LOC107785938 CHLRE_03g184651v5
Function* DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 uncharacterized LOC100282783 DNA repair RAD51-like protein DNA repair protein RAD51 homolog 4-like DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4 DNA repair protein RAD51 homolog 4-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100827134 100192176 4346376 100282783 837289 100780427 101264490 100257115 25492474 107959080 107906167 107806596 107785938 5717423
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