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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100216672   DNA glycosylase superfamily protein 
 zma-r.6   100216672   DNA glycosylase superfamily protein 
 zma-u.5   103632764   probable GMP synthase [glutamine-hydrolyzing] 
 zma-u.5   103641812   DNA glycosylase superfamily protein 
 zma-u.5   100273848   DNA-3-methyladenine glycosylase I 
 sbi-r.1   8058425   probable GMP synthase [glutamine-hydrolyzing] 
 sbi-r.1   8075892   probable GMP synthase [glutamine-hydrolyzing] 
 osa-u.5   4341682   uncharacterized LOC4341682 
 osa-u.5   4336309   uncharacterized LOC4336309 
 tae-r.2   123149459   uncharacterized LOC123149459 
 hvu-r.1   123427150   probable GMP synthase [glutamine-hydrolyzing] 
 hvu-r.1   123410964   uncharacterized LOC123410964 
 bdi-r.1   100841287   uncharacterized LOC100841287 
 bdi-r.1   100824759   uncharacterized LOC100824759 
 ath-u.5   AT5G57970   DNA glycosylase superfamily protein 
 ath-u.5   AT1G15970   DNA glycosylase superfamily protein 
 ath-u.5   AT1G80850   DNA glycosylase superfamily protein 
 gma-u.5   100785912   probable GMP synthase [glutamine-hydrolyzing] 
 gma-u.5   100801026   probable GMP synthase [glutamine-hydrolyzing] 
 gma-u.5   100805836   probable GMP synthase [glutamine-hydrolyzing] 
 sly-u.5   101247118   uncharacterized LOC101247118 
 sly-u.5   101267869   uncharacterized LOC101267869 
 bra-r.6   103830461   probable GMP synthase [glutamine-hydrolyzing] 
 bra-r.6   103832451   DNA-3-methyladenine glycosylase 1 
 bra-r.6   103836010   probable GMP synthase [glutamine-hydrolyzing] 
 vvi-u.5   100267363   uncharacterized LOC100267363 
 vvi-u.5   100258710   uncharacterized LOC100258710 
 ppo-u.5   7465959   uncharacterized LOC7465959 
 ppo-u.5   7493231   uncharacterized LOC7493231 
 ppo-u.5   7493396   uncharacterized LOC7493396 
 mtr-u.5   11433926   probable GMP synthase [glutamine-hydrolyzing] 
 mtr-u.5   11439558   probable GMP synthase [glutamine-hydrolyzing] 
 ghi-r.1   107958460   probable GMP synthase [glutamine-hydrolyzing] 
 ghi-r.1   107901594   probable GMP synthase [glutamine-hydrolyzing] 
 ghi-r.1   107906421   probable GMP synthase [glutamine-hydrolyzing] 
 bna-r.1   106353385   DNA-3-methyladenine glycosylase 1-like 
 bna-r.1   106354818   DNA-3-methyladenine glycosylase 1 
 bna-r.1   106387579   uncharacterized LOC106387579 
 sot-r.1   102594169   uncharacterized LOC102594169 
 sot-r.1   102595001   probable GMP synthase [glutamine-hydrolyzing] 
 cit-r.1   102607933   uncharacterized LOC102607933 
 nta-r.1   107780907   uncharacterized LOC107780907 
 nta-r.1   107788881   uncharacterized LOC107788881 
 nta-r.1   107801558   uncharacterized LOC107801558 

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Top 50 coexpressed genes to 100216672 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100216672 (zma-u.5 coexpression data)

CoexMap"100216672"


zmaLOC100216672 | Entrez gene ID : 100216672      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 2 2 1 2 2 3 3 2 3 2 3 2 3 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03410 [list] [network] Base excision repair (53 genes)
GO BP
GO:0006284 [list] [network] base-excision repair  (35 genes)  IEA  
GO CC
GO MF
GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity  (12 genes)  IEA  
Protein NP_001296831.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cysk 1  (predict for NP_001296831.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001296831.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100216672
zma-r.6
for
100216672
zma-u.5
for
103632764
zma-u.5
for
103641812
zma-u.5
for
100273848
sbi-r.1
for
8058425
sbi-r.1
for
8075892
osa-u.5
for
4341682
osa-u.5
for
4336309
tae-r.2
for
123149459
hvu-r.1
for
123427150
hvu-r.1
for
123410964
bdi-r.1
for
100841287
bdi-r.1
for
100824759
ath-u.5
for
AT5G57970
ath-u.5
for
AT1G15970
ath-u.5
for
AT1G80850
gma-u.5
for
100785912
gma-u.5
for
100801026
gma-u.5
for
100805836
sly-u.5
for
101247118
sly-u.5
for
101267869
bra-r.6
for
103830461
bra-r.6
for
103832451
bra-r.6
for
103836010
vvi-u.5
for
100267363
vvi-u.5
for
100258710
ppo-u.5
for
7465959
ppo-u.5
for
7493231
ppo-u.5
for
7493396
mtr-u.5
for
11433926
mtr-u.5
for
11439558
ghi-r.1
for
107958460
ghi-r.1
for
107901594
ghi-r.1
for
107906421
bna-r.1
for
106353385
bna-r.1
for
106354818
bna-r.1
for
106387579
sot-r.1
for
102594169
sot-r.1
for
102595001
cit-r.1
for
102607933
nta-r.1
for
107780907
nta-r.1
for
107788881
nta-r.1
for
107801558


Ortholog ID: 2512
Species zma zma zma sbi sbi osa osa tae hvu hvu bdi bdi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC100216672 LOC103632764 LOC100273848 LOC8058425 LOC8075892 LOC4341682 LOC4336309 LOC123045938 LOC123427150 LOC123410964 LOC100841287 LOC100824759 AT5G57970 AT1G15970 AT1G80850 LOC100801026 LOC100814780 LOC100783263 LOC101247118 LOC101267869 LOC103830461 LOC103832451 LOC103836010 LOC100267363 LOC100258710 LOC7465959 LOC7493231 LOC7493396 LOC11433926 LOC11439558 LOC107906887 LOC107961663 LOC107888426 LOC106387579 LOC106402818 LOC106430770 LOC102594169 LOC102595001 LOC102607933 LOC107780907 LOC107788881 LOC107801000
Function* DNA glycosylase superfamily protein probable GMP synthase [glutamine-hydrolyzing] DNA-3-methyladenine glycosylase I probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC4341682 uncharacterized LOC4336309 probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC123410964 uncharacterized LOC100841287 uncharacterized LOC100824759 DNA glycosylase superfamily protein DNA glycosylase superfamily protein DNA glycosylase superfamily protein probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC100814780 probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC101247118 uncharacterized LOC101267869 probable GMP synthase [glutamine-hydrolyzing] DNA-3-methyladenine glycosylase 1 probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC100267363 uncharacterized LOC100258710 uncharacterized LOC7465959 uncharacterized LOC7493231 uncharacterized LOC7493396 probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] DNA-3-methyladenine glycosylase 1 probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC107888426 uncharacterized LOC106387579 DNA-3-methyladenine glycosylase 1 DNA-3-methyladenine glycosylase 1-like uncharacterized LOC102594169 probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC102607933 uncharacterized LOC107780907 uncharacterized LOC107788881 uncharacterized LOC107801000
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 3
ath01200 Carbon metabolism 3
ath01240 Biosynthesis of cofactors 2
ath00030 Pentose phosphate pathway 2
ath00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100216672 103632764 100273848 8058425 8075892 4341682 4336309 123045938 123427150 123410964 100841287 100824759 835908 838167 844424 100801026 100814780 100783263 101247118 101267869 103830461 103832451 103836010 100267363 100258710 7465959 7493231 7493396 11433926 11439558 107906887 107961663 107888426 106387579 106402818 106430770 102594169 102595001 102607933 107780907 107788881 107801000
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