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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100217132   Chloroplast J-like domain 1 
 zma-r.6   100217132   Chloroplast J-like domain 1 
 zma-u.5   100272810   Chloroplast J-like domain 1 
 sbi-r.1   8074057   uncharacterized LOC8074057 
 osa-u.5   4344571   uncharacterized LOC4344571 
 osa-u.5   4348904   uncharacterized LOC4348904 
 tae-r.2   123159367   uncharacterized LOC123159367 
 tae-r.2   123169808   uncharacterized LOC123169808 
 tae-r.2   123147480   uncharacterized LOC123147480 
 hvu-r.1   123407576   uncharacterized LOC123407576 
 bdi-r.1   100821624   uncharacterized LOC100821624 
 ath-u.5   CJD1   Chloroplast J-like domain 1 
 gma-u.5   100814672   uncharacterized LOC100814672 
 gma-u.5   100805399   uncharacterized LOC100805399 
 sly-u.5   101248473   protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic 
 bra-r.6   103871607   uncharacterized LOC103871607 
 vvi-u.5   100243269   protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic 
 ppo-u.5   7487178   protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic 
 ppo-u.5   7474622   protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic 
 mtr-u.5   25499715   uncharacterized LOC25499715 
 ghi-r.1   107962960   uncharacterized LOC107962960 
 ghi-r.1   121223478   uncharacterized LOC121223478 
 bna-r.1   106346317   uncharacterized LOC106346317 
 bna-r.1   111198164   uncharacterized LOC111198164 
 sot-r.1   102589954   uncharacterized LOC102589954 
 cit-r.1   102612297   protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic 
 nta-r.1   107832639   protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic 
 nta-r.1   107779229   protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic 
 cre-r.1   CHLRE_03g171100v5   uncharacterized protein 

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Top 50 coexpressed genes to 100217132 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100217132 (zma-u.5 coexpression data)

CoexMap"100217132"


zmaLOC100217132 | Entrez gene ID : 100217132      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 2 3 1 1 1 2 1 1 1 2 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0031969 [list] [network] chloroplast membrane  (71 genes)  IEA  
GO MF
Protein NP_001346570.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001346570.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001346570.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100217132
zma-r.6
for
100217132
zma-u.5
for
100272810
sbi-r.1
for
8074057
osa-u.5
for
4344571
osa-u.5
for
4348904
tae-r.2
for
123159367
tae-r.2
for
123169808
tae-r.2
for
123147480
hvu-r.1
for
123407576
bdi-r.1
for
100821624
ath-u.5
for
CJD1
gma-u.5
for
100814672
gma-u.5
for
100805399
sly-u.5
for
101248473
bra-r.6
for
103871607
vvi-u.5
for
100243269
ppo-u.5
for
7487178
ppo-u.5
for
7474622
mtr-u.5
for
25499715
ghi-r.1
for
107962960
ghi-r.1
for
121223478
bna-r.1
for
106346317
bna-r.1
for
111198164
sot-r.1
for
102589954
cit-r.1
for
102612297
nta-r.1
for
107832639
nta-r.1
for
107779229
cre-r.1
for
CHLRE_03g171100v5


Ortholog ID: 7784
Species zma zma sbi osa osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100217132 LOC100272810 LOC8074057 LOC4344571 LOC4348904 LOC123159367 LOC123169808 LOC123045702 LOC123407576 LOC100821624 CJD1 LOC100814672 LOC100805399 LOC101248473 LOC103871607 LOC100243269 LOC7487178 LOC7474622 LOC25499715 LOC107962960 LOC121223478 LOC106346317 LOC111198164 LOC102589954 LOC102612297 LOC107832639 LOC107779229 CHLRE_03g171100v5
Function* Chloroplast J-like domain 1 Chloroplast J-like domain 1 uncharacterized LOC8074057 uncharacterized LOC4344571 uncharacterized LOC4348904 uncharacterized LOC123159367 uncharacterized LOC123169808 uncharacterized LOC123045702 uncharacterized LOC123407576 uncharacterized LOC100821624 Chloroplast J-like domain 1 uncharacterized LOC100814672 uncharacterized LOC100805399 protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic uncharacterized LOC103871607 protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic uncharacterized LOC25499715 uncharacterized LOC107962960 uncharacterized LOC121223478 uncharacterized LOC106346317 uncharacterized LOC111198164 uncharacterized LOC102589954 protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
osa00300 Lysine biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00261 Monobactam biosynthesis 3
tae00300 Lysine biosynthesis 3
tae01230 Biosynthesis of amino acids 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae00562 Inositol phosphate metabolism 3
tae00920 Sulfur metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 4
hvu00860 Porphyrin metabolism 3
hvu00300 Lysine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
bdi01240 Biosynthesis of cofactors 3
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma01240 Biosynthesis of cofactors 4
gma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 4
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00860 Porphyrin metabolism 3
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00860 Porphyrin metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 3
nta01232 Nucleotide metabolism 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00230 Purine metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100217132 100272810 8074057 4344571 4348904 123159367 123169808 123045702 123407576 100821624 837386 100814672 100805399 101248473 103871607 100243269 7487178 7474622 25499715 107962960 121223478 106346317 111198164 102589954 102612297 107832639 107779229 66052833
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