ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7487178	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
ppo-r.4	7487178	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
ppo-u.5	7474622	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
gma-u.5	100814672	uncharacterized LOC100814672
gma-u.5	100805399	uncharacterized LOC100805399
mtr-u.5	25499715	uncharacterized LOC25499715
ath-u.5	CJD1	Chloroplast J-like domain 1
vvi-u.5	100243269	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
sly-u.5	101248473	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
osa-u.5	4344571	uncharacterized LOC4344571
osa-u.5	4348904	uncharacterized LOC4348904
zma-u.5	100272810	Chloroplast J-like domain 1
zma-u.5	100217132	Chloroplast J-like domain 1

functional annotation

KEGG

GO BP

GO CC

GO:0031969 [list] [network] chloroplast membrane

(75 genes)

IEA

GO MF

Protein

XP_002325333.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 2

(predict for XP_002325333.1)

Subcellular
localization
TargetP

chlo 8, mito 3

(predict for XP_002325333.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7487178 .	ppo-r.4 for 7487178 .	ppo-u.5 for 7474622 .	gma-u.5 for 100814672 .	gma-u.5 for 100805399 .	mtr-u.5 for 25499715 .	ath-u.5 for CJD1 .	vvi-u.5 for 100243269 .	sly-u.5 for 101248473 .	osa-u.5 for 4344571 .	osa-u.5 for 4348904 .	zma-u.5 for 100272810 .	zma-u.5 for 100217132 .

Ortholog ID: 7784

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

CJD1

Function^*

Chloroplast J-like domain 1

uncharacterized LOC100805399

uncharacterized LOC100814672

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

uncharacterized LOC4348904

uncharacterized LOC4344571

Chloroplast J-like domain 1

uncharacterized LOC103871607

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

uncharacterized LOC25499715

uncharacterized LOC123169808

uncharacterized LOC123045702

uncharacterized LOC123407576

uncharacterized LOC121223478

uncharacterized LOC107962960

uncharacterized LOC106346317

uncharacterized LOC111198164

uncharacterized protein

uncharacterized LOC8074057

uncharacterized LOC102589954

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

uncharacterized LOC100821624

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	4
gma01240	Biosynthesis of cofactors	4
gma00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	3
gma01230	Biosynthesis of amino acids	3
gma00860	Porphyrin metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	3
osa00300	Lysine biosynthesis	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5
tae00562	Inositol phosphate metabolism	3
tae00920	Sulfur metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	4
hvu00860	Porphyrin metabolism	3
hvu00300	Lysine biosynthesis	2
hvu01230	Biosynthesis of amino acids	2
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	4
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	5
cre00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot00860	Porphyrin metabolism	3
sot00061	Fatty acid biosynthesis	2
sot01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit00860	Porphyrin metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	4
bdi01240	Biosynthesis of cofactors	3
bdi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	3
nta01232	Nucleotide metabolism	3
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	4
nta01232	Nucleotide metabolism	4
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00230	Purine metabolism	2
nta00260	Glycine, serine and threonine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

837386

100805399

100814672

101248473

4348904

4344571

100217132

100272810

103871607

100243269

7474622

7487178

25499715

123169808

123045702

123407576

121223478

107962960

106346317

111198164

66052833

8074057

102589954

102612297

100821624

107832639

107779229

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7487178 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7487178 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	3	2	1	1	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7487178 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7487178 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**