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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100245723   E3 ubiquitin-protein ligase APD1 
 vvi-r.5   100245723   E3 ubiquitin-protein ligase APD1 
 vvi-m.5   100245723   E3 ubiquitin-protein ligase APD1 
 vvi-u.5   100247198   E3 ubiquitin-protein ligase APD2 
 vvi-u.5   100248821   E3 ubiquitin-protein ligase APD2 
 vvi-u.5   100258653   E3 ubiquitin-protein ligase APD2 
 ath-u.5   APD1   RING/U-box superfamily protein 
 ath-u.5   APD2   RING/U-box superfamily protein 
 gma-u.5   100777075   E3 ubiquitin-protein ligase APD1 
 gma-u.5   100777141   E3 ubiquitin-protein ligase APD2 
 gma-u.5   100791057   E3 ubiquitin-protein ligase APD2 
 bra-r.6   103857765   E3 ubiquitin-protein ligase APD1 
 bra-r.6   103855419   E3 ubiquitin-protein ligase APD2 
 ppo-u.5   7466072   E3 ubiquitin-protein ligase APD2 
 ghi-r.1   107959190   E3 ubiquitin-protein ligase APD2 
 ghi-r.1   107892564   E3 ubiquitin-protein ligase APD2 
 ghi-r.1   107906620   E3 ubiquitin-protein ligase APD2 
 bna-r.1   106454635   E3 ubiquitin-protein ligase APD1 
 bna-r.1   106438161   E3 ubiquitin-protein ligase APD1-like 
 cit-r.1   102608051   E3 ubiquitin-protein ligase APD2 
 cit-r.1   102622796   E3 ubiquitin-protein ligase APD2-like 
 sly-u.5   101252132   E3 ubiquitin-protein ligase APD4 
 sly-u.5   101252808   E3 ubiquitin-protein ligase APD2 
 sot-r.1   102603607   uncharacterized LOC102603607 
 sot-r.1   102599744   E3 ubiquitin-protein ligase MYLIP-A 
 nta-r.1   107831645   E3 ubiquitin-protein ligase APD2-like 
 nta-r.1   107831062   E3 ubiquitin-protein ligase APD2 
 cre-r.1   CHLRE_16g649150v5   uncharacterized protein 
 cre-r.1   CHLRE_01g000750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100245723 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100245723 (vvi-u.5 coexpression data)

CoexMap"100245723"


vviLOC100245723 | Entrez gene ID : 100245723    
Species vvi ath gma bra ppo ghi bna cit sly sot nta cre bdi tae zma mtr sbi hvu osa
Paralog 6 2 3 2 1 3 2 2 2 2 2 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002283899.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  extr 2,  cyto_E.R. 2  (predict for XP_002283899.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002283899.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100245723
vvi-r.5
for
100245723
vvi-m.5
for
100245723
vvi-u.5
for
100247198
vvi-u.5
for
100248821
vvi-u.5
for
100258653
ath-u.5
for
APD1
ath-u.5
for
APD2
gma-u.5
for
100777075
gma-u.5
for
100777141
gma-u.5
for
100791057
bra-r.6
for
103857765
bra-r.6
for
103855419
ppo-u.5
for
7466072
ghi-r.1
for
107959190
ghi-r.1
for
107892564
ghi-r.1
for
107906620
bna-r.1
for
106454635
bna-r.1
for
106438161
cit-r.1
for
102608051
cit-r.1
for
102622796
sly-u.5
for
101252132
sly-u.5
for
101252808
sot-r.1
for
102603607
sot-r.1
for
102599744
nta-r.1
for
107831645
nta-r.1
for
107831062
cre-r.1
for
CHLRE_16g649150v5
cre-r.1
for
CHLRE_01g000750v5


Ortholog ID: 1842
Species vvi vvi vvi ath gma gma gma bra bra ppo ghi ghi ghi bna bna cit cit sly sly sot sot nta nta cre cre
Symbol LOC100245723 LOC100247198 LOC100258653 APD2 LOC100777075 LOC100791057 LOC100794488 LOC103857765 LOC103855419 LOC7466072 LOC107892564 LOC107906620 LOC107958061 LOC106438161 LOC106358274 LOC102608051 LOC102622796 LOC101252132 LOC101252808 LOC102603607 LOC102599744 LOC107831645 LOC107831062 CHLRE_16g649150v5 CHLRE_01g000750v5
Function* E3 ubiquitin-protein ligase APD1 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD2 RING/U-box superfamily protein E3 ubiquitin-protein ligase APD1 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD1 E3 ubiquitin-protein ligase APD1 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD1-like E3 ubiquitin-protein ligase APD1 E3 ubiquitin-protein ligase APD2 E3 ubiquitin-protein ligase APD2-like E3 ubiquitin-protein ligase APD4 E3 ubiquitin-protein ligase APD2 uncharacterized LOC102603607 E3 ubiquitin-protein ligase MYLIP-A E3 ubiquitin-protein ligase APD2-like E3 ubiquitin-protein ligase APD2 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 6
sot00520 Amino sugar and nucleotide sugar metabolism 5
sot01250 Biosynthesis of nucleotide sugars 5
sot00052 Galactose metabolism 3
sot00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00600 Sphingolipid metabolism 2
cre04382 Cornified envelope formation 2
cre00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100245723 100247198 100258653 831860 100777075 100791057 100794488 103857765 103855419 7466072 107892564 107906620 107958061 106438161 106358274 102608051 102622796 101252132 101252808 102603607 102599744 107831645 107831062 5723817 66051883
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