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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100247160   zinc finger CCCH domain-containing protein 5 
 vvi-r.5   100247160   zinc finger CCCH domain-containing protein 5 
 vvi-m.5   100247160   zinc finger CCCH domain-containing protein 5 
 ath-u.5   AT1G10320   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 gma-u.5   100794145   zinc finger CCCH domain-containing protein 5 
 gma-u.5   100789091   zinc finger CCCH domain-containing protein 5 
 ppo-u.5   18098363   zinc finger CCCH domain-containing protein 5 
 mtr-u.5   11421150   zinc finger CCCH domain-containing protein 5 
 sly-u.5   101257606   zinc finger CCCH domain-containing protein 5 
 osa-u.5   4329674   zinc finger CCCH domain-containing protein 16-like 
 zma-u.5   100857066   uncharacterized LOC100857066 

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Top 50 coexpressed genes to 100247160 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100247160 (vvi-u.5 coexpression data)

CoexMap"100247160"


vviLOC100247160 | Entrez gene ID : 100247160      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (134 genes)  IEA  
GO CC
GO:0089701 [list] [network] U2AF complex  (6 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (125 genes)  IEA  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (7 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2138 genes)  IEA  
Protein XP_010657918.1 [sequence] [blastp]
XP_059597105.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_010657918.1)
nucl 10  (predict for XP_059597105.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_010657918.1)
other 5,  chlo 3  (predict for XP_059597105.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100247160
vvi-r.5
for
100247160
vvi-m.5
for
100247160
ath-u.5
for
AT1G10320
gma-u.5
for
100794145
gma-u.5
for
100789091
ppo-u.5
for
18098363
mtr-u.5
for
11421150
sly-u.5
for
101257606
osa-u.5
for
4329674
zma-u.5
for
100857066


Ortholog ID: 10443
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100247160 AT1G10320 LOC100794145 LOC100789091 LOC103868103 LOC18098363 LOC11421150 LOC107910661 LOC107920000 LOC106362412 LOC106453104 LOC102620970 LOC102610763 LOC101257606 LOC102605870 LOC107830837 LOC107815844 LOC4329674 LOC100857066 LOC123113574 LOC123123098 LOC123452563 LOC8064276 LOC100829010
Function* zinc finger CCCH domain-containing protein 5 Zinc finger C-x8-C-x5-C-x3-H type family protein zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5-like zinc finger CCCH domain-containing protein 5-like zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 uncharacterized LOC107830837 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 16-like uncharacterized LOC100857066 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100247160 837571 100794145 100789091 103868103 18098363 11421150 107910661 107920000 106362412 106453104 102620970 102610763 101257606 102605870 107830837 107815844 4329674 100857066 123113574 123123098 123452563 8064276 100829010
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