Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8064276   zinc finger CCCH domain-containing protein 16 
 zma-u.5   100857066   uncharacterized LOC100857066 
 osa-u.5   4329674   zinc finger CCCH domain-containing protein 16-like 
 ath-u.5   AT1G10320   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 gma-u.5   100794145   zinc finger CCCH domain-containing protein 5 
 gma-u.5   100789091   zinc finger CCCH domain-containing protein 5 
 sly-u.5   101257606   zinc finger CCCH domain-containing protein 5 
 vvi-u.5   100247160   zinc finger CCCH domain-containing protein 5 
 ppo-u.5   18098363   zinc finger CCCH domain-containing protein 5 
 mtr-u.5   11421150   zinc finger CCCH domain-containing protein 5 

close


Top 50 coexpressed genes to 8064276 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8064276 (sbi-r.1 coexpression data)

CoexMap"8064276"


sbiLOC8064276 | Entrez gene ID : 8064276    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (170 genes)  IEA  
GO CC
GO:0089701 [list] [network] U2AF complex  (8 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (145 genes)  IEA  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (9 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2038 genes)  IEA  
Protein XP_002453991.2 [sequence] [blastp]
XP_021314210.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002453991.2)
nucl 9  (predict for XP_021314210.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002453991.2)
chlo 9  (predict for XP_021314210.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8064276

.
zma-u.5
for
100857066

.
osa-u.5
for
4329674

.
ath-u.5
for
AT1G10320

.
gma-u.5
for
100794145

.
gma-u.5
for
100789091

.
sly-u.5
for
101257606

.
vvi-u.5
for
100247160

.
ppo-u.5
for
18098363

.
mtr-u.5
for
11421150

.


Ortholog ID: 10443
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT1G10320 LOC100794145 LOC100789091 LOC101257606 LOC4329674 LOC100857066 LOC103868103 LOC100247160 LOC18098363 LOC11421150 LOC123113574 LOC123123098 LOC123452563 LOC107910661 LOC107920000 LOC106362412 LOC106453104 LOC8064276 LOC102605870 LOC102620970 LOC102610763 LOC100829010 LOC107830837 LOC107815844
Function* Zinc finger C-x8-C-x5-C-x3-H type family protein zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 16-like uncharacterized LOC100857066 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5-like zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5-like zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 16 uncharacterized LOC107830837 zinc finger CCCH domain-containing protein 5
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837571 100794145 100789091 101257606 4329674 100857066 103868103 100247160 18098363 11421150 123113574 123123098 123452563 107910661 107920000 106362412 106453104 8064276 102605870 102620970 102610763 100829010 107830837 107815844
The preparation time of this page was 0.1 [sec].