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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920000   zinc finger CCCH domain-containing protein 5 
 ath-u.5   AT1G10320   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 gma-u.5   100794145   zinc finger CCCH domain-containing protein 5 
 gma-u.5   100789091   zinc finger CCCH domain-containing protein 5 
 vvi-u.5   100247160   zinc finger CCCH domain-containing protein 5 
 ppo-u.5   18098363   zinc finger CCCH domain-containing protein 5 
 mtr-u.5   11421150   zinc finger CCCH domain-containing protein 5 
 sly-u.5   101257606   zinc finger CCCH domain-containing protein 5 
 osa-u.5   4329674   zinc finger CCCH domain-containing protein 16-like 
 zma-u.5   100857066   uncharacterized LOC100857066 

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Top 50 coexpressed genes to 107920000 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920000 (ghi-r.1 coexpression data)

CoexMap"107920000"


ghiLOC107920000 | Entrez gene ID : 107920000    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (384 genes)  IEA  
GO CC
GO:0089701 [list] [network] U2AF complex  (15 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (305 genes)  IEA  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (20 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_016704962.1 [sequence] [blastp]
XP_016704963.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016704962.1)
nucl 10  (predict for XP_016704963.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016704962.1)
other 8  (predict for XP_016704963.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920000
ath-u.5
for
AT1G10320
gma-u.5
for
100794145
gma-u.5
for
100789091
vvi-u.5
for
100247160
ppo-u.5
for
18098363
mtr-u.5
for
11421150
sly-u.5
for
101257606
osa-u.5
for
4329674
zma-u.5
for
100857066


Ortholog ID: 10443
Species ghi ghi ath bra bna bna cit cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107910661 LOC107920000 AT1G10320 LOC103868103 LOC106362412 LOC106453104 LOC102620970 LOC102610763 LOC100794145 LOC100789091 LOC100247160 LOC18098363 LOC11421150 LOC101257606 LOC102605870 LOC107830837 LOC107815844 LOC4329674 LOC100857066 LOC123113574 LOC123123098 LOC123452563 LOC8064276 LOC100829010
Function* zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 Zinc finger C-x8-C-x5-C-x3-H type family protein zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5-like zinc finger CCCH domain-containing protein 5-like zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 5 uncharacterized LOC107830837 zinc finger CCCH domain-containing protein 5 zinc finger CCCH domain-containing protein 16-like uncharacterized LOC100857066 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16 zinc finger CCCH domain-containing protein 16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107910661 107920000 837571 103868103 106362412 106453104 102620970 102610763 100794145 100789091 100247160 18098363 11421150 101257606 102605870 107830837 107815844 4329674 100857066 123113574 123123098 123452563 8064276 100829010
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