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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100247182   KH domain-containing protein At1g09660/At1g09670 
 vvi-r.5   100247182   KH domain-containing protein At1g09660/At1g09670 
 vvi-m.5   100247182   KH domain-containing protein At1g09660/At1g09670 
 ath-u.5   AT1G09660   RNA-binding KH domain-containing protein 
 gma-u.5   100796731   KH domain-containing protein At1g09660-like 
 ppo-u.5   18111146   KH domain-containing protein At1g09660/At1g09670 
 ppo-u.5   18098335   KH domain-containing protein At1g09660/At1g09670 
 mtr-u.5   11430327   KH domain-containing protein At1g09660/At1g09670 
 sly-u.5   101264467   KH domain-containing protein At1g09660/At1g09670 
 osa-u.5   4338818   KH domain-containing protein At1g09660/At1g09670 
 osa-u.5   4324889   KH domain-containing protein At1g09660/At1g09670 
 zma-u.5   100274205   KH domain-containing protein 

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Top 50 coexpressed genes to 100247182 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100247182 (vvi-u.5 coexpression data)

CoexMap"100247182"


vviLOC100247182 | Entrez gene ID : 100247182      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (19 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (233 genes)  IEA  
Protein XP_002263798.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  cyto 1,  chlo 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_002263798.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_002263798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100247182
vvi-r.5
for
100247182
vvi-m.5
for
100247182
ath-u.5
for
AT1G09660
gma-u.5
for
100796731
ppo-u.5
for
18111146
ppo-u.5
for
18098335
mtr-u.5
for
11430327
sly-u.5
for
101264467
osa-u.5
for
4338818
osa-u.5
for
4324889
zma-u.5
for
100274205


Ortholog ID: 5880
Species vvi ath gma bra bra ppo ppo mtr ghi ghi bna bna cit sly sot nta nta osa osa zma tae tae hvu hvu sbi bdi
Symbol LOC100247182 AT1G09660 LOC100796731 LOC103836319 LOC103871739 LOC18098335 LOC18111146 LOC11430327 LOC107928370 LOC107898681 LOC106362368 LOC106346258 LOC102624747 LOC101264467 LOC102586492 LOC107817078 LOC107820668 LOC4324889 LOC4338818 LOC100274205 LOC123071787 LOC123062919 LOC123442770 LOC123445104 LOC8063152 LOC100828371
Function* KH domain-containing protein At1g09660/At1g09670 RNA-binding KH domain-containing protein KH domain-containing protein At1g09660-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly04120 Ubiquitin mediated proteolysis 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot04141 Protein processing in endoplasmic reticulum 3
sot04144 Endocytosis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta04141 Protein processing in endoplasmic reticulum 6
nta04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00790 Folate biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100247182 837494 100796731 103836319 103871739 18098335 18111146 11430327 107928370 107898681 106362368 106346258 102624747 101264467 102586492 107817078 107820668 4324889 4338818 100274205 123071787 123062919 123442770 123445104 8063152 100828371
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