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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100828371   KH domain-containing protein At1g09660/At1g09670 
 tae-r.2   123062919   KH domain-containing protein At1g09660/At1g09670 
 tae-r.2   123071787   KH domain-containing protein At1g09660/At1g09670 
 tae-r.2   123080113   KH domain-containing protein At1g09660/At1g09670 
 hvu-r.1   123442770   KH domain-containing protein At1g09660/At1g09670-like 
 hvu-r.1   123445104   KH domain-containing protein At1g09660/At1g09670-like 
 osa-u.5   4324889   KH domain-containing protein At1g09660/At1g09670 
 osa-u.5   4338818   KH domain-containing protein At1g09660/At1g09670 
 zma-u.5   100274205   KH domain-containing protein 
 sbi-r.1   8063152   KH domain-containing protein At1g09660/At1g09670 
 ath-u.5   AT1G09660   RNA-binding KH domain-containing protein 
 gma-u.5   100796731   KH domain-containing protein At1g09660-like 
 sly-u.5   101264467   KH domain-containing protein At1g09660/At1g09670 
 bra-r.6   103871739   KH domain-containing protein At1g09660/At1g09670 
 bra-r.6   103836319   KH domain-containing protein At1g09660/At1g09670 
 vvi-u.5   100247182   KH domain-containing protein At1g09660/At1g09670 
 ppo-u.5   18098335   KH domain-containing protein At1g09660/At1g09670 
 ppo-u.5   18111146   KH domain-containing protein At1g09660/At1g09670 
 mtr-u.5   11430327   KH domain-containing protein At1g09660/At1g09670 
 ghi-r.1   107898681   KH domain-containing protein At1g09660/At1g09670 
 ghi-r.1   107928370   KH domain-containing protein At1g09660/At1g09670 
 ghi-r.1   107933392   KH domain-containing protein At1g09660/At1g09670 
 bna-r.1   106453142   KH domain-containing protein At1g09660/At1g09670 
 bna-r.1   106346258   KH domain-containing protein At1g09660/At1g09670-like 
 bna-r.1   106397397   KH domain-containing protein At1g09660/At1g09670 
 sot-r.1   102586492   KH domain-containing protein At1g09660/At1g09670 
 cit-r.1   102624747   KH domain-containing protein At1g09660/At1g09670 
 nta-r.1   107820668   KH domain-containing protein At1g09660/At1g09670-like 
 nta-r.1   107817078   KH domain-containing protein At1g09660/At1g09670-like 
 nta-r.1   107804284   KH domain-containing protein At1g09660/At1g09670 

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Top 50 coexpressed genes to 100828371 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100828371 (bdi-r.1 coexpression data)

CoexMap"100828371"


bdiLOC100828371 | Entrez gene ID : 100828371      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 2 2 1 1 1 1 1 2 1 2 1 3 3 1 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (19 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
Protein XP_003564796.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  chlo 1,  extr 1,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1  (predict for XP_003564796.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003564796.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100828371
tae-r.2
for
123062919
tae-r.2
for
123071787
tae-r.2
for
123080113
hvu-r.1
for
123442770
hvu-r.1
for
123445104
osa-u.5
for
4324889
osa-u.5
for
4338818
zma-u.5
for
100274205
sbi-r.1
for
8063152
ath-u.5
for
AT1G09660
gma-u.5
for
100796731
sly-u.5
for
101264467
bra-r.6
for
103871739
bra-r.6
for
103836319
vvi-u.5
for
100247182
ppo-u.5
for
18098335
ppo-u.5
for
18111146
mtr-u.5
for
11430327
ghi-r.1
for
107898681
ghi-r.1
for
107928370
ghi-r.1
for
107933392
bna-r.1
for
106453142
bna-r.1
for
106346258
bna-r.1
for
106397397
sot-r.1
for
102586492
cit-r.1
for
102624747
nta-r.1
for
107820668
nta-r.1
for
107817078
nta-r.1
for
107804284


Ortholog ID: 5880
Species bdi tae tae tae hvu hvu osa osa zma sbi ath gma sly bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta nta
Symbol LOC100828371 LOC123062919 LOC123071787 LOC123080113 LOC123442770 LOC123445104 LOC4324889 LOC4338818 LOC100274205 LOC8063152 AT1G09660 LOC100796731 LOC101264467 LOC103871739 LOC103836319 LOC100247182 LOC18098335 LOC18111146 LOC11430327 LOC107898681 LOC107928370 LOC107933392 LOC106453142 LOC106346258 LOC106362368 LOC102586492 LOC102624747 LOC107820668 LOC107817078 LOC107804284
Function* KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein KH domain-containing protein At1g09660/At1g09670 RNA-binding KH domain-containing protein KH domain-containing protein At1g09660-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00790 Folate biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly04120 Ubiquitin mediated proteolysis 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot04141 Protein processing in endoplasmic reticulum 3
sot04144 Endocytosis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta04141 Protein processing in endoplasmic reticulum 6
nta04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828371 123062919 123071787 123080113 123442770 123445104 4324889 4338818 100274205 8063152 837494 100796731 101264467 103871739 103836319 100247182 18098335 18111146 11430327 107898681 107928370 107933392 106453142 106346258 106362368 102586492 102624747 107820668 107817078 107804284
The preparation time of this page was 3.5 [sec].