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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106397397   KH domain-containing protein At1g09660/At1g09670 
 ath-u.5   AT1G09660   RNA-binding KH domain-containing protein 
 gma-u.5   100796731   KH domain-containing protein At1g09660-like 
 vvi-u.5   100247182   KH domain-containing protein At1g09660/At1g09670 
 ppo-u.5   18098335   KH domain-containing protein At1g09660/At1g09670 
 ppo-u.5   18111146   KH domain-containing protein At1g09660/At1g09670 
 mtr-u.5   11430327   KH domain-containing protein At1g09660/At1g09670 
 sly-u.5   101264467   KH domain-containing protein At1g09660/At1g09670 
 osa-u.5   4324889   KH domain-containing protein At1g09660/At1g09670 
 osa-u.5   4338818   KH domain-containing protein At1g09660/At1g09670 
 zma-u.5   100274205   KH domain-containing protein 

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Top 50 coexpressed genes to 106397397 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106397397 (bna-r.1 coexpression data)

CoexMap"106397397"


bnaLOC106397397 | Entrez gene ID : 106397397    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (76 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_013693437.1 [sequence] [blastp]
XP_013693438.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  extr 1  (predict for XP_013693437.1)
nucl 6,  cyto 2,  extr 1  (predict for XP_013693438.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_013693437.1)
chlo 5,  other 4  (predict for XP_013693438.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106397397

.
ath-u.5
for
AT1G09660

.
gma-u.5
for
100796731

.
vvi-u.5
for
100247182

.
ppo-u.5
for
18098335

.
ppo-u.5
for
18111146

.
mtr-u.5
for
11430327

.
sly-u.5
for
101264467

.
osa-u.5
for
4324889

.
osa-u.5
for
4338818

.
zma-u.5
for
100274205

.


Ortholog ID: 5880
Species ath gma sly osa osa zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G09660 LOC100796731 LOC101264467 LOC4324889 LOC4338818 LOC100274205 LOC103836319 LOC103871739 LOC100247182 LOC18098335 LOC18111146 LOC11430327 LOC123071787 LOC123062919 LOC123442770 LOC123445104 LOC107928370 LOC107898681 LOC106362368 LOC106346258 LOC8063152 LOC102586492 LOC102624747 LOC100828371 LOC107817078 LOC107820668
Function* RNA-binding KH domain-containing protein KH domain-containing protein At1g09660-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670 KH domain-containing protein At1g09660/At1g09670-like KH domain-containing protein At1g09660/At1g09670-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly04120 Ubiquitin mediated proteolysis 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00790 Folate biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot04141 Protein processing in endoplasmic reticulum 3
sot04144 Endocytosis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta04141 Protein processing in endoplasmic reticulum 6
nta04144 Endocytosis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837494 100796731 101264467 4324889 4338818 100274205 103836319 103871739 100247182 18098335 18111146 11430327 123071787 123062919 123442770 123445104 107928370 107898681 106362368 106346258 8063152 102586492 102624747 100828371 107817078 107820668
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