ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100247578	rhamnogalacturonan I rhamnosyltransferase 1
vvi-r.5	100247578	rhamnogalacturonan I rhamnosyltransferase 1
vvi-m.5	100247578	rhamnogalacturonan I rhamnosyltransferase 1
vvi-u.5	100251581	rhamnogalacturonan I rhamnosyltransferase 1
ath-u.5	AT3G02250	O-fucosyltransferase family protein
ath-u.5	AT5G15740	O-fucosyltransferase family protein
gma-u.5	100776860	rhamnogalacturonan I rhamnosyltransferase 1
gma-u.5	100778199	rhamnogalacturonan I rhamnosyltransferase 1
gma-u.5	100782071	rhamnogalacturonan I rhamnosyltransferase 1
bra-r.6	103858950	rhamnogalacturonan I rhamnosyltransferase 1
bra-r.6	103846391	rhamnogalacturonan I rhamnosyltransferase 1
ppo-u.5	7453863	rhamnogalacturonan I rhamnosyltransferase 1
ppo-u.5	7484721	rhamnogalacturonan I rhamnosyltransferase 1
ppo-u.5	18107361	rhamnogalacturonan I rhamnosyltransferase 1-like
mtr-u.5	11411703	rhamnogalacturonan I rhamnosyltransferase 1
mtr-u.5	25495439	rhamnogalacturonan I rhamnosyltransferase 1
mtr-u.5	25493921	rhamnogalacturonan I rhamnosyltransferase 1
ghi-r.1	107954885	rhamnogalacturonan I rhamnosyltransferase 1
ghi-r.1	107952822	rhamnogalacturonan I rhamnosyltransferase 1
ghi-r.1	107949766	rhamnogalacturonan I rhamnosyltransferase 1
bna-r.1	125580825	rhamnogalacturonan I rhamnosyltransferase 1-like
bna-r.1	106432429	rhamnogalacturonan I rhamnosyltransferase 1-like
bna-r.1	106438924	rhamnogalacturonan I rhamnosyltransferase 1
cit-r.1	102618438	rhamnogalacturonan I rhamnosyltransferase 1-like
cit-r.1	102629411	hypothetical protein
sly-u.5	101263915	rhamnogalacturonan I rhamnosyltransferase 1
sly-u.5	101265902	rhamnogalacturonan I rhamnosyltransferase 1-like
sly-u.5	101263008	rhamnogalacturonan I rhamnosyltransferase 1-like
sot-r.1	102580268	uncharacterized protein At1g04910-like
sot-r.1	102601962	uncharacterized protein At1g04910-like
sot-r.1	102580225	uncharacterized protein At1g04910-like
nta-r.1	107783896	rhamnogalacturonan I rhamnosyltransferase 1-like
nta-r.1	107815526	rhamnogalacturonan I rhamnosyltransferase 1-like
nta-r.1	107808717	rhamnogalacturonan I rhamnosyltransferase 1
osa-u.5	9269670	rhamnogalacturonan I rhamnosyltransferase 1
osa-u.5	4340767	rhamnogalacturonan I rhamnosyltransferase 1
osa-u.5	4330591	rhamnogalacturonan I rhamnosyltransferase 1
zma-u.5	103639891	uncharacterized LOC103639891
zma-u.5	103627678	O-fucosyltransferase family protein
zma-u.5	100384451	uncharacterized LOC100384451
tae-r.2	123128255	rhamnogalacturonan I rhamnosyltransferase 1
tae-r.2	123104069	rhamnogalacturonan I rhamnosyltransferase 1
tae-r.2	123112293	rhamnogalacturonan I rhamnosyltransferase 1
hvu-r.1	123399105	rhamnogalacturonan I rhamnosyltransferase 1-like
hvu-r.1	123409656	rhamnogalacturonan I rhamnosyltransferase 1-like
sbi-r.1	8076398	uncharacterized protein At1g04910
sbi-r.1	8077707	uncharacterized protein At1g04910
sbi-r.1	8083278	uncharacterized protein At1g04910
bdi-r.1	100828174	O-fucosyltransferase 34
bdi-r.1	100837431	O-fucosyltransferase 34
bdi-r.1	100827276	O-fucosyltransferase 34

Top 50 coexpressed genes to 100247578 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100247578 (vvi-u.5 coexpression data)

CoexMap"100247578"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(4496 genes)

IEA

GO MF

Protein

XP_010663502.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 3, cyto_nucl 3

(predict for XP_010663502.1)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_010663502.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100247578	vvi-r.5 for 100247578	vvi-m.5 for 100247578	vvi-u.5 for 100251581	ath-u.5 for AT3G02250	ath-u.5 for AT5G15740	gma-u.5 for 100776860	gma-u.5 for 100778199	gma-u.5 for 100782071	bra-r.6 for 103858950	bra-r.6 for 103846391	ppo-u.5 for 7453863	ppo-u.5 for 7484721	ppo-u.5 for 18107361	mtr-u.5 for 11411703	mtr-u.5 for 25495439	mtr-u.5 for 25493921	ghi-r.1 for 107954885	ghi-r.1 for 107952822	ghi-r.1 for 107949766	bna-r.1 for 125580825	bna-r.1 for 106432429	bna-r.1 for 106438924	cit-r.1 for 102618438	cit-r.1 for 102629411	sly-u.5 for 101263915	sly-u.5 for 101265902	sly-u.5 for 101263008	sot-r.1 for 102580268	sot-r.1 for 102601962	sot-r.1 for 102580225	nta-r.1 for 107783896	nta-r.1 for 107815526	nta-r.1 for 107808717	osa-u.5 for 9269670	osa-u.5 for 4340767	osa-u.5 for 4330591	zma-u.5 for 103639891	zma-u.5 for 103627678	zma-u.5 for 100384451	tae-r.2 for 123128255	tae-r.2 for 123104069	tae-r.2 for 123112293	hvu-r.1 for 123399105	hvu-r.1 for 123409656	sbi-r.1 for 8076398	sbi-r.1 for 8077707	sbi-r.1 for 8083278	bdi-r.1 for 100828174	bdi-r.1 for 100837431	bdi-r.1 for 100827276

Ortholog

Ortholog ID: 1314

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*