ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107783896	rhamnogalacturonan I rhamnosyltransferase 1-like
nta-r.1	107788289	rhamnogalacturonan I rhamnosyltransferase 1-like
nta-r.1	107795261	rhamnogalacturonan I rhamnosyltransferase 1-like
nta-r.1	107796158	rhamnogalacturonan I rhamnosyltransferase 1
sly-u.5	101263008	rhamnogalacturonan I rhamnosyltransferase 1-like
sly-u.5	101265902	rhamnogalacturonan I rhamnosyltransferase 1-like
sly-u.5	101263915	rhamnogalacturonan I rhamnosyltransferase 1
sot-r.1	102601962	uncharacterized protein At1g04910-like
sot-r.1	102580225	uncharacterized protein At1g04910-like
sot-r.1	102580268	uncharacterized protein At1g04910-like
ath-u.5	AT3G02250	O-fucosyltransferase family protein
ath-u.5	AT5G15740	O-fucosyltransferase family protein
gma-u.5	100814267	rhamnogalacturonan I rhamnosyltransferase 1
gma-u.5	100776860	rhamnogalacturonan I rhamnosyltransferase 1
bra-r.6	103856159	rhamnogalacturonan I rhamnosyltransferase 1
bra-r.6	103858950	rhamnogalacturonan I rhamnosyltransferase 1
bra-r.6	103846391	rhamnogalacturonan I rhamnosyltransferase 1
vvi-u.5	100251581	rhamnogalacturonan I rhamnosyltransferase 1
vvi-u.5	100247578	rhamnogalacturonan I rhamnosyltransferase 1
ppo-u.5	18107361	rhamnogalacturonan I rhamnosyltransferase 1-like
ppo-u.5	7484721	rhamnogalacturonan I rhamnosyltransferase 1
ppo-u.5	7453863	rhamnogalacturonan I rhamnosyltransferase 1
mtr-u.5	11411703	rhamnogalacturonan I rhamnosyltransferase 1
mtr-u.5	25495439	rhamnogalacturonan I rhamnosyltransferase 1
mtr-u.5	25493921	rhamnogalacturonan I rhamnosyltransferase 1
ghi-r.1	107943378	rhamnogalacturonan I rhamnosyltransferase 1
ghi-r.1	107926649	rhamnogalacturonan I rhamnosyltransferase 1
ghi-r.1	107949766	rhamnogalacturonan I rhamnosyltransferase 1
bna-r.1	125606960	rhamnogalacturonan I rhamnosyltransferase 1
bna-r.1	106349205	rhamnogalacturonan I rhamnosyltransferase 1-like
bna-r.1	125580825	rhamnogalacturonan I rhamnosyltransferase 1-like
cit-r.1	102618438	rhamnogalacturonan I rhamnosyltransferase 1-like
cit-r.1	102629411	hypothetical protein
osa-u.5	9269670	rhamnogalacturonan I rhamnosyltransferase 1
osa-u.5	4330591	rhamnogalacturonan I rhamnosyltransferase 1
osa-u.5	4340767	rhamnogalacturonan I rhamnosyltransferase 1
zma-u.5	100384451	uncharacterized LOC100384451
zma-u.5	100304383	O-fucosyltransferase family protein
zma-u.5	103639891	uncharacterized LOC103639891
tae-r.2	123112293	rhamnogalacturonan I rhamnosyltransferase 1
tae-r.2	123104069	rhamnogalacturonan I rhamnosyltransferase 1
tae-r.2	123150166	rhamnogalacturonan I rhamnosyltransferase 1
hvu-r.1	123409656	rhamnogalacturonan I rhamnosyltransferase 1-like
hvu-r.1	123399105	rhamnogalacturonan I rhamnosyltransferase 1-like
sbi-r.1	8083278	uncharacterized protein At1g04910
sbi-r.1	8077707	uncharacterized protein At1g04910
sbi-r.1	8076398	uncharacterized protein At1g04910
bdi-r.1	100837431	O-fucosyltransferase 34
bdi-r.1	100827276	O-fucosyltransferase 34
bdi-r.1	100828174	O-fucosyltransferase 34

Top 50 coexpressed genes to 107783896 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107783896 (nta-r.1 coexpression data)

CoexMap"107783896"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(8458 genes)

IEA

GO MF

Protein

XP_016460406.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, nucl 1, chlo 1, mito 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1

(predict for XP_016460406.1)

Subcellular
localization
TargetP

other 7

(predict for XP_016460406.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107783896	nta-r.1 for 107788289	nta-r.1 for 107795261	nta-r.1 for 107796158	sly-u.5 for 101263008	sly-u.5 for 101265902	sly-u.5 for 101263915	sot-r.1 for 102601962	sot-r.1 for 102580225	sot-r.1 for 102580268	ath-u.5 for AT3G02250	ath-u.5 for AT5G15740	gma-u.5 for 100814267	gma-u.5 for 100776860	bra-r.6 for 103856159	bra-r.6 for 103858950	bra-r.6 for 103846391	vvi-u.5 for 100251581	vvi-u.5 for 100247578	ppo-u.5 for 18107361	ppo-u.5 for 7484721	ppo-u.5 for 7453863	mtr-u.5 for 11411703	mtr-u.5 for 25495439	mtr-u.5 for 25493921	ghi-r.1 for 107943378	ghi-r.1 for 107926649	ghi-r.1 for 107949766	bna-r.1 for 125606960	bna-r.1 for 106349205	bna-r.1 for 125580825	cit-r.1 for 102618438	cit-r.1 for 102629411	osa-u.5 for 9269670	osa-u.5 for 4330591	osa-u.5 for 4340767	zma-u.5 for 100384451	zma-u.5 for 100304383	zma-u.5 for 103639891	tae-r.2 for 123112293	tae-r.2 for 123104069	tae-r.2 for 123150166	hvu-r.1 for 123409656	hvu-r.1 for 123399105	sbi-r.1 for 8083278	sbi-r.1 for 8077707	sbi-r.1 for 8076398	bdi-r.1 for 100837431	bdi-r.1 for 100827276	bdi-r.1 for 100828174

Ortholog

Ortholog ID: 1314

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

rhamnogalacturonan I rhamnosyltransferase 1-like