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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100248788   pentatricopeptide repeat-containing protein At3g03580 
 vvi-r.5   100248788   pentatricopeptide repeat-containing protein At3g03580 
 ath-u.5   AT3G03580   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101253623   pentatricopeptide repeat-containing protein At3g03580 

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Top 50 coexpressed genes to 100248788 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100248788 (vvi-u.5 coexpression data)

CoexMap"100248788"


vviLOC100248788 | Entrez gene ID : 100248788      
Species vvi ath sly bdi bra gma ppo sbi ghi sot nta cre tae zma mtr hvu cit bna osa
Paralog 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002264194.2 [sequence] [blastp]
XP_010661156.1 [sequence] [blastp]
XP_019080964.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  E.R. 1  (predict for XP_002264194.2)
chlo 9,  mito 1,  E.R. 1  (predict for XP_010661156.1)
chlo 9,  mito 1,  E.R. 1  (predict for XP_019080964.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_002264194.2)
mito 5  (predict for XP_010661156.1)
mito 5  (predict for XP_019080964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100248788
vvi-r.5
for
100248788
ath-u.5
for
AT3G03580
sly-u.5
for
101253623


Ortholog ID: 14732
Species vvi ath bra ghi ghi bna bna sly sot nta nta
Symbol LOC100248788 AT3G03580 LOC103855167 LOC107901010 LOC107913318 LOC125586944 LOC106416684 LOC101253623 LOC102596018 LOC107777620 LOC107821963
Function* pentatricopeptide repeat-containing protein At3g03580 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100248788 821229 103855167 107901010 107913318 125586944 106416684 101253623 102596018 107777620 107821963
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