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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102596018   pentatricopeptide repeat-containing protein At3g03580 
 sly-u.5   101253623   pentatricopeptide repeat-containing protein At3g03580 
 nta-r.1   107821963   pentatricopeptide repeat-containing protein At3g03580-like 
 nta-r.1   107777620   pentatricopeptide repeat-containing protein At3g03580-like 
 ath-u.5   AT3G03580   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103855167   pentatricopeptide repeat-containing protein At3g03580 
 vvi-u.5   100248788   pentatricopeptide repeat-containing protein At3g03580 
 ghi-r.1   107913318   pentatricopeptide repeat-containing protein At3g03580 
 ghi-r.1   107901010   pentatricopeptide repeat-containing protein At3g03580-like 
 bna-r.1   125586944   pentatricopeptide repeat-containing protein At3g03580-like 
 bna-r.1   106416684   pentatricopeptide repeat-containing protein At3g03580 

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Top 50 coexpressed genes to 102596018 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102596018 (sot-r.1 coexpression data)

CoexMap"102596018"


sotLOC102596018 | Entrez gene ID : 102596018      
Species sot sly nta ath bra vvi ghi bna hvu bdi osa tae ppo zma cre mtr sbi gma cit
Paralog 1 1 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (4917 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006354668.1 [sequence] [blastp]
XP_015167408.1 [sequence] [blastp]
XP_015167409.1 [sequence] [blastp]
XP_015167410.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_006354668.1)
chlo 9,  chlo_mito 5  (predict for XP_015167408.1)
chlo 9,  chlo_mito 5  (predict for XP_015167409.1)
chlo 9,  chlo_mito 5  (predict for XP_015167410.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_006354668.1)
mito 4,  other 3  (predict for XP_015167408.1)
mito 4,  other 3  (predict for XP_015167409.1)
mito 4,  other 3  (predict for XP_015167410.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102596018
sly-u.5
for
101253623
nta-r.1
for
107821963
nta-r.1
for
107777620
ath-u.5
for
AT3G03580
bra-r.6
for
103855167
vvi-u.5
for
100248788
ghi-r.1
for
107913318
ghi-r.1
for
107901010
bna-r.1
for
125586944
bna-r.1
for
106416684


Ortholog ID: 14732
Species sot sly nta nta ath bra vvi ghi ghi bna bna
Symbol LOC102596018 LOC101253623 LOC107821963 LOC107777620 AT3G03580 LOC103855167 LOC100248788 LOC107913318 LOC107901010 LOC125586944 LOC106416684
Function* pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102596018 101253623 107821963 107777620 821229 103855167 100248788 107913318 107901010 125586944 106416684
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