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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107777620   pentatricopeptide repeat-containing protein At3g03580-like 
 sly-u.5   101253623   pentatricopeptide repeat-containing protein At3g03580 
 ath-u.5   AT3G03580   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100248788   pentatricopeptide repeat-containing protein At3g03580 

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Top 50 coexpressed genes to 107777620 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107777620 (nta-r.1 coexpression data)

CoexMap"107777620"


ntaLOC107777620 | Entrez gene ID : 107777620      
Species nta sly ath vvi tae hvu zma cit bra ghi osa mtr ppo sbi bdi gma bna cre sot
Paralog 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016453160.1 [sequence] [blastp]
XP_016453161.1 [sequence] [blastp]
XP_016453162.1 [sequence] [blastp]
XP_016453163.1 [sequence] [blastp]
XP_016453164.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  E.R. 3,  cyto_nucl 3  (predict for XP_016453160.1)
cyto 5,  E.R. 3,  cyto_nucl 3  (predict for XP_016453161.1)
cyto 5,  E.R. 3,  cyto_nucl 3  (predict for XP_016453162.1)
cyto 5,  E.R. 3,  cyto_nucl 3  (predict for XP_016453163.1)
cyto 5,  E.R. 3,  cyto_nucl 3  (predict for XP_016453164.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_016453160.1)
other 6,  mito 4  (predict for XP_016453161.1)
other 6,  mito 4  (predict for XP_016453162.1)
other 6,  mito 4  (predict for XP_016453163.1)
other 6,  mito 4  (predict for XP_016453164.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107777620
sly-u.5
for
101253623
ath-u.5
for
AT3G03580
vvi-u.5
for
100248788


Ortholog ID: 14732
Species nta nta sly sot ath bra vvi ghi ghi bna bna
Symbol LOC107777620 LOC107821963 LOC101253623 LOC102596018 AT3G03580 LOC103855167 LOC100248788 LOC107901010 LOC107913318 LOC125586944 LOC106416684
Function* pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580 pentatricopeptide repeat-containing protein At3g03580-like pentatricopeptide repeat-containing protein At3g03580
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107777620 107821963 101253623 102596018 821229 103855167 100248788 107901010 107913318 125586944 106416684
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