Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100248901   psbQ-like protein 3, chloroplastic 
 vvi-r.5   100248901   psbQ-like protein 3, chloroplastic 
 vvi-m.5   100248901   psbQ-like protein 3, chloroplastic 
 ath-u.5   PQL3   PsbQ-like 3 
 gma-u.5   100784902   oxygen-evolving enhancer protein 3-1, chloroplastic-like 
 gma-u.5   100811804   psbQ-like protein 3, chloroplastic 
 ppo-u.5   18106638   psbQ-like protein 3, chloroplastic 
 mtr-u.5   11406097   psbQ-like protein 3, chloroplastic 
 sly-u.5   104646595   psbQ-like protein 3, chloroplastic 
 osa-u.5   4336434   psbQ-like protein 3, chloroplastic 
 zma-u.5   103646199   psbQ-like protein 3, chloroplastic 

close


Top 50 coexpressed genes to 100248901 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100248901 (vvi-u.5 coexpression data)

CoexMap"100248901"


vviLOC100248901 | Entrez gene ID : 100248901      
Species vvi ath gma ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (22 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (92 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (17 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (33 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (38 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (265 genes)  IEA  
Protein XP_002283897.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for XP_002283897.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002283897.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100248901

.
vvi-r.5
for
100248901

.
vvi-m.5
for
100248901

.
ath-u.5
for
PQL3

.
gma-u.5
for
100784902

.
gma-u.5
for
100811804

.
ppo-u.5
for
18106638

.
mtr-u.5
for
11406097

.
sly-u.5
for
104646595

.
osa-u.5
for
4336434

.
zma-u.5
for
103646199

.


Ortholog ID: 11149
Species ath gma gma sly osa zma bra vvi ppo mtr hvu ghi ghi sbi cit bdi nta nta
Symbol PQL3 LOC100784902 LOC100811804 LOC104646595 LOC4336434 LOC103646199 LOC103852321 LOC100248901 LOC18106638 LOC11406097 LOC123427273 LOC121219361 LOC107936801 LOC8082843 LOC102620573 LOC100824557 LOC107775253 LOC107831983
Function* PsbQ-like 3 oxygen-evolving enhancer protein 3-1, chloroplastic-like psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00710 Carbon fixation by Calvin cycle 2
ppo01230 Biosynthesis of amino acids 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
mtr04146 Peroxisome 2
mtr03010 Ribosome 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3768499 100784902 100811804 104646595 4336434 103646199 103852321 100248901 18106638 11406097 123427273 121219361 107936801 8082843 102620573 100824557 107775253 107831983
The preparation time of this page was 0.1 [sec].