Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100250769   eukaryotic translation initiation factor 3 subunit I 
 vvi-r.5   100250769   eukaryotic translation initiation factor 3 subunit I 
 vvi-m.5   100250769   eukaryotic translation initiation factor 3 subunit I 
 ath-u.5   TRIP-1   TGF-beta receptor interacting protein 1 
 ath-u.5   AT2G46290   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100819486   eukaryotic translation initiation factor 3 subunit I 
 gma-u.5   100793485   eukaryotic translation initiation factor 3 subunit I 
 gma-u.5   100781100   eukaryotic translation initiation factor 3 subunit I 
 ppo-u.5   7471451   eukaryotic translation initiation factor 3 subunit I 
 mtr-u.5   11422623   eukaryotic translation initiation factor 3 subunit I 
 sly-u.5   101262979   eukaryotic translation initiation factor 3 subunit I 
 osa-u.5   4338229   eukaryotic translation initiation factor 3 subunit I 
 osa-u.5   4345234   eukaryotic translation initiation factor 3 subunit I 
 zma-u.5   103648258   eukaryotic translation initiation factor 3 subunit I 
 zma-u.5   100281110   eukaryotic translation initiation factor 3 subunit 2 
 zma-u.5   100280358   uncharacterized LOC100280358 

close


Top 50 coexpressed genes to 100250769 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100250769 (vvi-u.5 coexpression data)

CoexMap"100250769"


vviLOC100250769 | Entrez gene ID : 100250769      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 3 1 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002183 [list] [network] cytoplasmic translational initiation  (15 genes)  IEA  
GO CC
GO:0071541 [list] [network] eukaryotic translation initiation factor 3 complex, eIF3m  (3 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (58 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002285281.1 [sequence] [blastp]
XP_059595350.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_002285281.1)
cyto 4,  chlo 3,  mito 2,  cyto_nucl 2  (predict for XP_059595350.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for XP_002285281.1)
other 7,  mito 5  (predict for XP_059595350.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100250769
vvi-r.5
for
100250769
vvi-m.5
for
100250769
ath-u.5
for
TRIP-1
ath-u.5
for
AT2G46290
gma-u.5
for
100819486
gma-u.5
for
100793485
gma-u.5
for
100781100
ppo-u.5
for
7471451
mtr-u.5
for
11422623
sly-u.5
for
101262979
osa-u.5
for
4338229
osa-u.5
for
4345234
zma-u.5
for
103648258
zma-u.5
for
100281110
zma-u.5
for
100280358


Ortholog ID: 4892
Species vvi ath gma gma bra bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa osa zma zma tae tae hvu sbi bdi cre cre
Symbol LOC100250769 TRIP-1 LOC100819486 LOC100781100 LOC103875217 LOC103854233 LOC7471451 LOC11422623 LOC107959041 LOC121203487 LOC106401815 LOC125597778 LOC102612031 LOC101262979 LOC102592807 LOC107786562 LOC107831796 LOC4338229 LOC4345234 LOC103648258 LOC100281110 LOC123092124 LOC101290669 LOC123448541 LOC8081165 LOC100841470 CHLRE_03g194400v5 CHLRE_01g032150v5
Function* eukaryotic translation initiation factor 3 subunit I TGF-beta receptor interacting protein 1 eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit 2 eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I uncharacterized protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03013 Nucleocytoplasmic transport 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03013 Nucleocytoplasmic transport 5
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 3
sly04626 Plant-pathogen interaction 2
sly03010 Ribosome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta00260 Glycine, serine and threonine metabolism 2
nta00750 Vitamin B6 metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01230 Biosynthesis of amino acids 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100250769 819236 100819486 100781100 103875217 103854233 7471451 11422623 107959041 121203487 106401815 125597778 102612031 101262979 102592807 107786562 107831796 4338229 4345234 103648258 100281110 123092124 101290669 123448541 8081165 100841470 5718721 5715397
The preparation time of this page was 0.1 [sec].