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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102612031   eukaryotic translation initiation factor 3 subunit I 
 ath-u.5   TRIP-1   TGF-beta receptor interacting protein 1 
 ath-u.5   AT2G46290   Transducin/WD40 repeat-like superfamily protein 
 bra-r.6   103854233   eukaryotic translation initiation factor 3 subunit I 
 bra-r.6   103875217   eukaryotic translation initiation factor 3 subunit I 
 ghi-r.1   107959041   eukaryotic translation initiation factor 3 subunit I 
 ghi-r.1   121204700   eukaryotic translation initiation factor 3 subunit I 
 ghi-r.1   121203487   eukaryotic translation initiation factor 3 subunit I 
 bna-r.1   125597778   eukaryotic translation initiation factor 3 subunit I-like 
 bna-r.1   106428669   eukaryotic translation initiation factor 3 subunit I-like 
 bna-r.1   106401815   eukaryotic translation initiation factor 3 subunit I 
 gma-u.5   100781100   eukaryotic translation initiation factor 3 subunit I 
 gma-u.5   100793485   eukaryotic translation initiation factor 3 subunit I 
 gma-u.5   100819486   eukaryotic translation initiation factor 3 subunit I 
 vvi-u.5   100250769   eukaryotic translation initiation factor 3 subunit I 
 ppo-u.5   7471451   eukaryotic translation initiation factor 3 subunit I 
 mtr-u.5   11422623   eukaryotic translation initiation factor 3 subunit I 
 sly-u.5   101262979   eukaryotic translation initiation factor 3 subunit I 
 sot-r.1   102592807   eukaryotic translation initiation factor 3 subunit I-like 
 nta-r.1   107786562   eukaryotic translation initiation factor 3 subunit I 
 nta-r.1   107831796   eukaryotic translation initiation factor 3 subunit I-like 
 osa-u.5   4345234   eukaryotic translation initiation factor 3 subunit I 
 osa-u.5   4338229   eukaryotic translation initiation factor 3 subunit I 
 zma-u.5   100281110   eukaryotic translation initiation factor 3 subunit 2 
 zma-u.5   100280358   uncharacterized LOC100280358 
 zma-u.5   103648258   eukaryotic translation initiation factor 3 subunit I 
 tae-r.2   123097006   eukaryotic translation initiation factor 3 subunit I 
 tae-r.2   123047101   eukaryotic translation initiation factor 3 subunit I 
 tae-r.2   123092124   eukaryotic translation initiation factor 3 subunit I 
 hvu-r.1   123448541   eukaryotic translation initiation factor 3 subunit I-like 
 sbi-r.1   8081165   eukaryotic translation initiation factor 3 subunit I 
 bdi-r.1   100841470   eukaryotic translation initiation factor 3 subunit I 
 cre-r.1   CHLRE_01g032150v5   uncharacterized protein 
 cre-r.1   CHLRE_03g194400v5   uncharacterized protein 

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Top 50 coexpressed genes to 102612031 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102612031 (cit-r.1 coexpression data)

CoexMap"102612031"


citLOC102612031 | Entrez gene ID : 102612031      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 2 3 3 3 1 1 1 1 1 2 2 3 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002183 [list] [network] cytoplasmic translational initiation  (16 genes)  IEA  
GO CC
GO:0071541 [list] [network] eukaryotic translation initiation factor 3 complex, eIF3m  (4 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (57 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006492275.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_006492275.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_006492275.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102612031
ath-u.5
for
TRIP-1
ath-u.5
for
AT2G46290
bra-r.6
for
103854233
bra-r.6
for
103875217
ghi-r.1
for
107959041
ghi-r.1
for
121204700
ghi-r.1
for
121203487
bna-r.1
for
125597778
bna-r.1
for
106428669
bna-r.1
for
106401815
gma-u.5
for
100781100
gma-u.5
for
100793485
gma-u.5
for
100819486
vvi-u.5
for
100250769
ppo-u.5
for
7471451
mtr-u.5
for
11422623
sly-u.5
for
101262979
sot-r.1
for
102592807
nta-r.1
for
107786562
nta-r.1
for
107831796
osa-u.5
for
4345234
osa-u.5
for
4338229
zma-u.5
for
100281110
zma-u.5
for
100280358
zma-u.5
for
103648258
tae-r.2
for
123097006
tae-r.2
for
123047101
tae-r.2
for
123092124
hvu-r.1
for
123448541
sbi-r.1
for
8081165
bdi-r.1
for
100841470
cre-r.1
for
CHLRE_01g032150v5
cre-r.1
for
CHLRE_03g194400v5


Ortholog ID: 4892
Species cit ath ath bra bra ghi ghi ghi bna bna bna gma gma gma vvi ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu sbi bdi cre cre
Symbol LOC102612031 TRIP-1 AT2G46290 LOC103854233 LOC103875217 LOC107959041 LOC121203487 LOC107906209 LOC125597778 LOC106401815 LOC106349253 LOC100781100 LOC100793485 LOC100819486 LOC100250769 LOC7471451 LOC11422623 LOC101262979 LOC102592807 LOC107786562 LOC107831796 LOC4345234 LOC4338229 LOC100281110 LOC100280358 LOC103648258 LOC123097006 LOC123092124 LOC101290669 LOC123448541 LOC8081165 LOC100841470 CHLRE_01g032150v5 CHLRE_03g194400v5
Function* eukaryotic translation initiation factor 3 subunit I TGF-beta receptor interacting protein 1 Transducin/WD40 repeat-like superfamily protein eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit 2 uncharacterized LOC100280358 eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I-like eukaryotic translation initiation factor 3 subunit I eukaryotic translation initiation factor 3 subunit I uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath00261 Monobactam biosynthesis 2
ath00300 Lysine biosynthesis 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03013 Nucleocytoplasmic transport 5
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03013 Nucleocytoplasmic transport 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 3
sly04626 Plant-pathogen interaction 2
sly03010 Ribosome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta00260 Glycine, serine and threonine metabolism 2
nta00750 Vitamin B6 metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01230 Biosynthesis of amino acids 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102612031 819236 819237 103854233 103875217 107959041 121203487 107906209 125597778 106401815 106349253 100781100 100793485 100819486 100250769 7471451 11422623 101262979 102592807 107786562 107831796 4345234 4338229 100281110 100280358 103648258 123097006 123092124 101290669 123448541 8081165 100841470 5715397 5718721
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